Hb_027445_050

Information

Type -
Description -
Location Contig27445: 53613-61227
Sequence    

Annotation

kegg
ID rcu:RCOM_1064240
description Microtubule-associated protein futsch, putative
nr
ID XP_012072215.1
description PREDICTED: titin isoform X13 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDD9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10262 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027445_050 0.0 - - PREDICTED: titin isoform X13 [Jatropha curcas]
2 Hb_001269_690 0.1788423243 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001524_090 0.1873516873 - - PREDICTED: uncharacterized protein LOC105113929 [Populus euphratica]
4 Hb_006586_030 0.1883435385 - - PREDICTED: transcription factor LHW isoform X1 [Jatropha curcas]
5 Hb_134894_010 0.1960656412 - - PREDICTED: E3 ubiquitin-protein ligase UPL5-like isoform X2 [Gossypium raimondii]
6 Hb_000140_410 0.1979610593 - - PREDICTED: uncharacterized protein At5g41620 isoform X1 [Jatropha curcas]
7 Hb_000733_210 0.2115539943 - - putative serine/threonine protein phosphatase [Angiostrongylus costaricensis]
8 Hb_002827_020 0.2127309705 - - PREDICTED: plant intracellular Ras-group-related LRR protein 5-like [Jatropha curcas]
9 Hb_002273_050 0.2135526881 - - PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like [Jatropha curcas]
10 Hb_001104_240 0.2138046728 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
11 Hb_000740_110 0.2188995742 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01850 [Jatropha curcas]
12 Hb_000200_280 0.223786909 - - PREDICTED: uncharacterized protein LOC105636924 [Jatropha curcas]
13 Hb_006588_150 0.2255221072 - - PREDICTED: steroid 5-alpha-reductase DET2 [Jatropha curcas]
14 Hb_000853_030 0.2260912263 - - sucrose synthase 2 [Hevea brasiliensis]
15 Hb_009848_040 0.2265840712 - - hypothetical protein B456_009G349600 [Gossypium raimondii]
16 Hb_002007_240 0.2273582446 - - PREDICTED: F-box protein At1g55000 [Jatropha curcas]
17 Hb_002876_290 0.227518781 - - PREDICTED: uncharacterized protein LOC104446353 [Eucalyptus grandis]
18 Hb_011716_090 0.2312111054 transcription factor TF Family: HRT putative transciption factor family protein [Populus trichocarpa]
19 Hb_067466_010 0.2313869942 - - ankyrin repeat protein [Bruguiera gymnorhiza]
20 Hb_011794_040 0.2315683519 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Populus euphratica]

Gene co-expression network

sample Hb_027445_050 Hb_027445_050 Hb_001269_690 Hb_001269_690 Hb_027445_050--Hb_001269_690 Hb_001524_090 Hb_001524_090 Hb_027445_050--Hb_001524_090 Hb_006586_030 Hb_006586_030 Hb_027445_050--Hb_006586_030 Hb_134894_010 Hb_134894_010 Hb_027445_050--Hb_134894_010 Hb_000140_410 Hb_000140_410 Hb_027445_050--Hb_000140_410 Hb_000733_210 Hb_000733_210 Hb_027445_050--Hb_000733_210 Hb_001269_690--Hb_000140_410 Hb_000200_280 Hb_000200_280 Hb_001269_690--Hb_000200_280 Hb_001529_050 Hb_001529_050 Hb_001269_690--Hb_001529_050 Hb_002273_050 Hb_002273_050 Hb_001269_690--Hb_002273_050 Hb_000227_060 Hb_000227_060 Hb_001269_690--Hb_000227_060 Hb_001104_240 Hb_001104_240 Hb_001269_690--Hb_001104_240 Hb_001524_090--Hb_006586_030 Hb_002827_020 Hb_002827_020 Hb_001524_090--Hb_002827_020 Hb_001524_090--Hb_001104_240 Hb_001524_090--Hb_000733_210 Hb_001524_090--Hb_134894_010 Hb_006586_030--Hb_001104_240 Hb_006586_030--Hb_002827_020 Hb_000086_660 Hb_000086_660 Hb_006586_030--Hb_000086_660 Hb_006586_030--Hb_001269_690 Hb_006586_030--Hb_000200_280 Hb_134894_010--Hb_006586_030 Hb_001989_020 Hb_001989_020 Hb_134894_010--Hb_001989_020 Hb_000283_150 Hb_000283_150 Hb_134894_010--Hb_000283_150 Hb_009848_040 Hb_009848_040 Hb_134894_010--Hb_009848_040 Hb_008066_070 Hb_008066_070 Hb_000140_410--Hb_008066_070 Hb_020805_170 Hb_020805_170 Hb_000140_410--Hb_020805_170 Hb_000905_170 Hb_000905_170 Hb_000140_410--Hb_000905_170 Hb_000140_410--Hb_001529_050 Hb_003623_070 Hb_003623_070 Hb_000140_410--Hb_003623_070 Hb_134469_010 Hb_134469_010 Hb_000733_210--Hb_134469_010 Hb_007590_070 Hb_007590_070 Hb_000733_210--Hb_007590_070 Hb_002666_020 Hb_002666_020 Hb_000733_210--Hb_002666_020 Hb_002007_240 Hb_002007_240 Hb_000733_210--Hb_002007_240 Hb_001427_070 Hb_001427_070 Hb_000733_210--Hb_001427_070 Hb_001636_020 Hb_001636_020 Hb_000733_210--Hb_001636_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0415354 0.0781761 0 0.022903 0.0188458 0.0650859
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0145478 0.022896 0.0218981 0.0953536 0

CAGE analysis