Hb_027445_090

Information

Type -
Description -
Location Contig27445: 92994-95678
Sequence    

Annotation

kegg
ID rcu:RCOM_1064090
description Oleosin1
nr
ID NP_001295667.1
description oleosin 18.2 kDa-like [Jatropha curcas]
swissprot
ID Q9SS98
description Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=2 SV=1
trembl
ID A8WE55
description 16.6 kDa oleosin OS=Jatropha curcas GN=Ole16.6 PE=2 SV=2
Gene Ontology
ID GO:0012511
description oleosin kda-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027445_090 0.0 - - oleosin 18.2 kDa-like [Jatropha curcas]
2 Hb_000256_100 0.1239713711 transcription factor TF Family: ERF PPLZ02 family protein [Populus trichocarpa]
3 Hb_006478_180 0.1671656147 - - Nonspecific lipid-transfer protein precursor, putative [Ricinus communis]
4 Hb_008406_010 0.167215011 - - PREDICTED: tyrosine aminotransferase-like [Populus euphratica]
5 Hb_003538_020 0.1709027769 - - (S)-N-methylcoclaurine 3'-hydroxylase isozyme, putative [Ricinus communis]
6 Hb_080225_010 0.1783116464 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
7 Hb_003057_080 0.1810871807 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 1-like [Jatropha curcas]
8 Hb_011283_010 0.1810990631 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
9 Hb_000617_340 0.1829797342 - - respiratory burst oxidase B [Manihot esculenta]
10 Hb_000140_160 0.1839074393 - - PREDICTED: neurofilament light polypeptide-like [Gossypium raimondii]
11 Hb_000007_110 0.1897581772 - - PREDICTED: peroxidase 11 [Jatropha curcas]
12 Hb_001366_250 0.190180524 - - PREDICTED: mannan endo-1,4-beta-mannosidase 4-like [Jatropha curcas]
13 Hb_002758_040 0.1903207601 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_159769_010 0.1907128253 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
15 Hb_005000_310 0.1922135024 - - PREDICTED: uncharacterized protein LOC105637900 [Jatropha curcas]
16 Hb_112082_030 0.1933771331 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
17 Hb_000003_470 0.1948220458 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000521_340 0.197186558 - - PREDICTED: beta-glucosidase 13-like [Jatropha curcas]
19 Hb_000648_120 0.1972526011 - - PREDICTED: L-type lectin-domain containing receptor kinase IV.1 [Vitis vinifera]
20 Hb_001769_090 0.1979823996 - - PREDICTED: uncharacterized protein LOC105630842 [Jatropha curcas]

Gene co-expression network

sample Hb_027445_090 Hb_027445_090 Hb_000256_100 Hb_000256_100 Hb_027445_090--Hb_000256_100 Hb_006478_180 Hb_006478_180 Hb_027445_090--Hb_006478_180 Hb_008406_010 Hb_008406_010 Hb_027445_090--Hb_008406_010 Hb_003538_020 Hb_003538_020 Hb_027445_090--Hb_003538_020 Hb_080225_010 Hb_080225_010 Hb_027445_090--Hb_080225_010 Hb_003057_080 Hb_003057_080 Hb_027445_090--Hb_003057_080 Hb_000256_100--Hb_080225_010 Hb_002057_010 Hb_002057_010 Hb_000256_100--Hb_002057_010 Hb_005000_040 Hb_005000_040 Hb_000256_100--Hb_005000_040 Hb_000256_100--Hb_003057_080 Hb_000617_340 Hb_000617_340 Hb_000256_100--Hb_000617_340 Hb_006478_180--Hb_003538_020 Hb_002758_040 Hb_002758_040 Hb_006478_180--Hb_002758_040 Hb_132880_030 Hb_132880_030 Hb_006478_180--Hb_132880_030 Hb_112082_030 Hb_112082_030 Hb_006478_180--Hb_112082_030 Hb_005511_050 Hb_005511_050 Hb_006478_180--Hb_005511_050 Hb_000010_120 Hb_000010_120 Hb_006478_180--Hb_000010_120 Hb_008225_080 Hb_008225_080 Hb_008406_010--Hb_008225_080 Hb_002232_370 Hb_002232_370 Hb_008406_010--Hb_002232_370 Hb_000245_140 Hb_000245_140 Hb_008406_010--Hb_000245_140 Hb_000758_030 Hb_000758_030 Hb_008406_010--Hb_000758_030 Hb_008406_010--Hb_112082_030 Hb_001357_260 Hb_001357_260 Hb_008406_010--Hb_001357_260 Hb_002534_080 Hb_002534_080 Hb_003538_020--Hb_002534_080 Hb_003891_060 Hb_003891_060 Hb_003538_020--Hb_003891_060 Hb_003538_020--Hb_112082_030 Hb_003538_020--Hb_005511_050 Hb_003538_020--Hb_002758_040 Hb_080225_010--Hb_003057_080 Hb_000347_550 Hb_000347_550 Hb_080225_010--Hb_000347_550 Hb_000614_180 Hb_000614_180 Hb_080225_010--Hb_000614_180 Hb_000086_730 Hb_000086_730 Hb_080225_010--Hb_000086_730 Hb_080225_010--Hb_005000_040 Hb_000045_230 Hb_000045_230 Hb_003057_080--Hb_000045_230 Hb_002311_240 Hb_002311_240 Hb_003057_080--Hb_002311_240 Hb_000019_220 Hb_000019_220 Hb_003057_080--Hb_000019_220 Hb_003057_080--Hb_000347_550 Hb_011283_010 Hb_011283_010 Hb_003057_080--Hb_011283_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0818064 0.6176 0.13686 0.546654 0 0.0802586
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0835632 0.394138 0 6.23395 0

CAGE analysis