Hb_027467_010

Information

Type -
Description -
Location Contig27467: 1017-1502
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa004106mg
description hypothetical protein
nr
ID XP_007222486.1
description hypothetical protein PRUPE_ppa004106mg [Prunus persica]
swissprot
ID Q9LS46
description Aluminum-activated malate transporter 9 OS=Arabidopsis thaliana GN=ALMT9 PE=2 SV=1
trembl
ID M5XWV4
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004106mg PE=4 SV=1
Gene Ontology
ID GO:0015743
description aluminum-activated malate transporter 9-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027467_010 0.0 - - hypothetical protein PRUPE_ppa004106mg [Prunus persica]
2 Hb_001619_040 0.2028527765 - - PREDICTED: uncharacterized protein LOC105630601 [Jatropha curcas]
3 Hb_024468_010 0.214957612 - - hypothetical protein CISIN_1g046520mg [Citrus sinensis]
4 Hb_028707_070 0.2214049332 - - short-chain dehydrogenase, putative [Ricinus communis]
5 Hb_000672_150 0.2217706782 - - Patatin T5 precursor, putative [Ricinus communis]
6 Hb_168707_040 0.2237049365 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
7 Hb_000021_050 0.2283894545 - - PREDICTED: uncharacterized protein LOC105645238 [Jatropha curcas]
8 Hb_002686_120 0.2325125033 - - short-chain type dehydrogenase, putative [Ricinus communis]
9 Hb_168319_010 0.2352638238 - - PREDICTED: ACT domain-containing protein ACR4 isoform X2 [Jatropha curcas]
10 Hb_000343_180 0.2396824986 - - NDWp3 [Podospora anserina]
11 Hb_000802_110 0.2401097471 - - hypothetical protein POPTR_0004s20690g [Populus trichocarpa]
12 Hb_003835_100 0.2403569113 - - PREDICTED: putative U-box domain-containing protein 50 [Jatropha curcas]
13 Hb_001616_110 0.2416131666 - - PREDICTED: RPM1-interacting protein 4 [Jatropha curcas]
14 Hb_002701_220 0.2449676924 - - PREDICTED: solute carrier family 25 member 44 [Jatropha curcas]
15 Hb_000671_170 0.2458538198 - - kinase, putative [Ricinus communis]
16 Hb_002805_020 0.2513997735 transcription factor TF Family: SRS transcription factor, putative [Ricinus communis]
17 Hb_005147_010 0.2515972358 - - PREDICTED: uncharacterized protein LOC105629670 [Jatropha curcas]
18 Hb_001171_050 0.2536410802 - - PREDICTED: uncharacterized protein DDB_G0284459 [Jatropha curcas]
19 Hb_001825_060 0.254480318 - - PREDICTED: F-box/kelch-repeat protein OR23 [Jatropha curcas]
20 Hb_001794_060 0.2567690548 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_027467_010 Hb_027467_010 Hb_001619_040 Hb_001619_040 Hb_027467_010--Hb_001619_040 Hb_024468_010 Hb_024468_010 Hb_027467_010--Hb_024468_010 Hb_028707_070 Hb_028707_070 Hb_027467_010--Hb_028707_070 Hb_000672_150 Hb_000672_150 Hb_027467_010--Hb_000672_150 Hb_168707_040 Hb_168707_040 Hb_027467_010--Hb_168707_040 Hb_000021_050 Hb_000021_050 Hb_027467_010--Hb_000021_050 Hb_000152_330 Hb_000152_330 Hb_001619_040--Hb_000152_330 Hb_000226_080 Hb_000226_080 Hb_001619_040--Hb_000226_080 Hb_001619_040--Hb_024468_010 Hb_001117_130 Hb_001117_130 Hb_001619_040--Hb_001117_130 Hb_005356_040 Hb_005356_040 Hb_001619_040--Hb_005356_040 Hb_000649_150 Hb_000649_150 Hb_001619_040--Hb_000649_150 Hb_000086_630 Hb_000086_630 Hb_024468_010--Hb_000086_630 Hb_007044_050 Hb_007044_050 Hb_024468_010--Hb_007044_050 Hb_001604_150 Hb_001604_150 Hb_024468_010--Hb_001604_150 Hb_001105_110 Hb_001105_110 Hb_024468_010--Hb_001105_110 Hb_000001_130 Hb_000001_130 Hb_024468_010--Hb_000001_130 Hb_000979_110 Hb_000979_110 Hb_028707_070--Hb_000979_110 Hb_001153_180 Hb_001153_180 Hb_028707_070--Hb_001153_180 Hb_006816_480 Hb_006816_480 Hb_028707_070--Hb_006816_480 Hb_004453_080 Hb_004453_080 Hb_028707_070--Hb_004453_080 Hb_012725_120 Hb_012725_120 Hb_028707_070--Hb_012725_120 Hb_000699_230 Hb_000699_230 Hb_028707_070--Hb_000699_230 Hb_001959_120 Hb_001959_120 Hb_000672_150--Hb_001959_120 Hb_001113_030 Hb_001113_030 Hb_000672_150--Hb_001113_030 Hb_000672_150--Hb_168707_040 Hb_001472_130 Hb_001472_130 Hb_000672_150--Hb_001472_130 Hb_000671_170 Hb_000671_170 Hb_000672_150--Hb_000671_170 Hb_008173_030 Hb_008173_030 Hb_000672_150--Hb_008173_030 Hb_000802_110 Hb_000802_110 Hb_168707_040--Hb_000802_110 Hb_128524_020 Hb_128524_020 Hb_168707_040--Hb_128524_020 Hb_000139_100 Hb_000139_100 Hb_168707_040--Hb_000139_100 Hb_002766_050 Hb_002766_050 Hb_168707_040--Hb_002766_050 Hb_000304_030 Hb_000304_030 Hb_000021_050--Hb_000304_030 Hb_003835_100 Hb_003835_100 Hb_000021_050--Hb_003835_100 Hb_000021_050--Hb_001619_040 Hb_000009_050 Hb_000009_050 Hb_000021_050--Hb_000009_050 Hb_012573_040 Hb_012573_040 Hb_000021_050--Hb_012573_040 Hb_004993_060 Hb_004993_060 Hb_000021_050--Hb_004993_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.82093 0.280088 0.485293 0.0808208 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.01588 1.11715 1.27308 0.822227 0.838599

CAGE analysis