Hb_027472_120

Information

Type -
Description -
Location Contig27472: 87436-93852
Sequence    

Annotation

kegg
ID rcu:RCOM_1574740
description thiosulfate sulfertansferase, putative (EC:2.8.1.2)
nr
ID XP_012087370.1
description PREDICTED: thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial isoform X1 [Jatropha curcas]
swissprot
ID O64530
description Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial OS=Arabidopsis thaliana GN=STR1 PE=1 SV=1
trembl
ID A0A067JYK1
description Sulfurtransferase OS=Jatropha curcas GN=JCGZ_22615 PE=4 SV=1
Gene Ontology
ID GO:0004792
description thiosulfate 3-mercaptopyruvate sulfurtransferase mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28764: 87511-93850
cDNA
(Sanger)
(ID:Location)		 016_H09.ab1: 90653-93850

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027472_120 0.0 - - PREDICTED: thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial isoform X1 [Jatropha curcas]
2 Hb_002311_310 0.0597260654 - - PREDICTED: uncharacterized protein LOC100246622 [Vitis vinifera]
3 Hb_004007_220 0.0684529647 - - PREDICTED: casein kinase II subunit alpha [Jatropha curcas]
4 Hb_001005_030 0.0699180515 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X3 [Jatropha curcas]
5 Hb_001821_160 0.0728902029 - - serine/arginine rich splicing factor, putative [Ricinus communis]
6 Hb_150651_030 0.0765345498 - - PREDICTED: metallophosphoesterase 1-like [Jatropha curcas]
7 Hb_000915_080 0.0768515506 - - PREDICTED: uncharacterized protein LOC105628777 [Jatropha curcas]
8 Hb_003579_050 0.0775348077 - - PREDICTED: 14-3-3 protein 7 [Jatropha curcas]
9 Hb_000414_050 0.0779598299 - - hypothetical protein JCGZ_19588 [Jatropha curcas]
10 Hb_004109_280 0.0785886637 - - PREDICTED: enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like [Populus euphratica]
11 Hb_001269_230 0.0793378159 - - PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Jatropha curcas]
12 Hb_004785_100 0.0794334115 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002042_030 0.0797298209 - - PREDICTED: protein YIPF1 homolog [Jatropha curcas]
14 Hb_001418_040 0.0806797903 - - PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like [Jatropha curcas]
15 Hb_000922_020 0.0811554338 - - protein binding protein, putative [Ricinus communis]
16 Hb_000331_110 0.0827120332 - - Conserved oligomeric Golgi complex component, putative [Ricinus communis]
17 Hb_003878_110 0.0832983823 - - PREDICTED: uncharacterized protein LOC105637024 [Jatropha curcas]
18 Hb_132840_010 0.0856830413 - - serine/threonine-protein kinase, putative [Ricinus communis]
19 Hb_006960_050 0.0857163439 - - PREDICTED: PRKR-interacting protein 1 [Jatropha curcas]
20 Hb_032202_080 0.0867815732 - - PREDICTED: peroxisome biogenesis protein 16-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_027472_120 Hb_027472_120 Hb_002311_310 Hb_002311_310 Hb_027472_120--Hb_002311_310 Hb_004007_220 Hb_004007_220 Hb_027472_120--Hb_004007_220 Hb_001005_030 Hb_001005_030 Hb_027472_120--Hb_001005_030 Hb_001821_160 Hb_001821_160 Hb_027472_120--Hb_001821_160 Hb_150651_030 Hb_150651_030 Hb_027472_120--Hb_150651_030 Hb_000915_080 Hb_000915_080 Hb_027472_120--Hb_000915_080 Hb_002311_310--Hb_001005_030 Hb_000922_020 Hb_000922_020 Hb_002311_310--Hb_000922_020 Hb_032202_080 Hb_032202_080 Hb_002311_310--Hb_032202_080 Hb_001089_070 Hb_001089_070 Hb_002311_310--Hb_001089_070 Hb_007929_080 Hb_007929_080 Hb_002311_310--Hb_007929_080 Hb_002997_080 Hb_002997_080 Hb_004007_220--Hb_002997_080 Hb_001269_230 Hb_001269_230 Hb_004007_220--Hb_001269_230 Hb_001047_220 Hb_001047_220 Hb_004007_220--Hb_001047_220 Hb_009646_030 Hb_009646_030 Hb_004007_220--Hb_009646_030 Hb_002684_040 Hb_002684_040 Hb_004007_220--Hb_002684_040 Hb_000362_170 Hb_000362_170 Hb_001005_030--Hb_000362_170 Hb_000373_080 Hb_000373_080 Hb_001005_030--Hb_000373_080 Hb_001005_030--Hb_001269_230 Hb_001635_040 Hb_001635_040 Hb_001005_030--Hb_001635_040 Hb_004912_030 Hb_004912_030 Hb_001005_030--Hb_004912_030 Hb_003186_020 Hb_003186_020 Hb_001005_030--Hb_003186_020 Hb_004785_100 Hb_004785_100 Hb_001821_160--Hb_004785_100 Hb_000331_110 Hb_000331_110 Hb_001821_160--Hb_000331_110 Hb_079526_030 Hb_079526_030 Hb_001821_160--Hb_079526_030 Hb_012753_170 Hb_012753_170 Hb_001821_160--Hb_012753_170 Hb_005588_090 Hb_005588_090 Hb_001821_160--Hb_005588_090 Hb_022256_060 Hb_022256_060 Hb_001821_160--Hb_022256_060 Hb_004032_410 Hb_004032_410 Hb_150651_030--Hb_004032_410 Hb_034432_030 Hb_034432_030 Hb_150651_030--Hb_034432_030 Hb_000544_010 Hb_000544_010 Hb_150651_030--Hb_000544_010 Hb_001379_110 Hb_001379_110 Hb_150651_030--Hb_001379_110 Hb_012490_060 Hb_012490_060 Hb_150651_030--Hb_012490_060 Hb_000007_280 Hb_000007_280 Hb_000915_080--Hb_000007_280 Hb_002836_140 Hb_002836_140 Hb_000915_080--Hb_002836_140 Hb_000101_380 Hb_000101_380 Hb_000915_080--Hb_000101_380 Hb_002042_030 Hb_002042_030 Hb_000915_080--Hb_002042_030 Hb_002783_170 Hb_002783_170 Hb_000915_080--Hb_002783_170 Hb_000414_050 Hb_000414_050 Hb_000915_080--Hb_000414_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
43.0615 24.0844 54.7555 25.695 55.3869 40.8849
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
24.8514 24.8809 23.873 25.9564 31.5267

CAGE analysis