Hb_027751_050

Information

Type -
Description -
Location Contig27751: 51205-58432
Sequence    

Annotation

kegg
ID vvi:100254382
description kinesin-4
nr
ID KDP20118.1
description hypothetical protein JCGZ_05887 [Jatropha curcas]
swissprot
ID Q8W1Y3
description Kinesin KP1 OS=Arabidopsis thaliana GN=KP1 PE=1 SV=2
trembl
ID A0A067JBL3
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_05887 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin-4-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027751_050 0.0 - - hypothetical protein JCGZ_05887 [Jatropha curcas]
2 Hb_002073_070 0.2094470999 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
3 Hb_002595_100 0.2136611462 - - heat-shock protein, putative [Ricinus communis]
4 Hb_002900_060 0.231380572 - - CI small heat shock protein 2 [Prunus salicina]
5 Hb_013394_090 0.2385825009 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000861_090 0.2401607421 - - -
7 Hb_000005_120 0.2429361462 transcription factor TF Family: C2H2 PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Jatropha curcas]
8 Hb_000011_130 0.2429361462 - - lipase [Ricinus communis]
9 Hb_000046_140 0.2429361462 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000081_070 0.2429361462 - - -
11 Hb_000171_010 0.2429361462 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
12 Hb_000189_040 0.2429361462 - - hypothetical protein [Trichoderma aureoviride]
13 Hb_000210_170 0.2429361462 - - -
14 Hb_000252_010 0.2429361462 - - -
15 Hb_000288_040 0.2429361462 - - -
16 Hb_000300_490 0.2429361462 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000317_500 0.2429361462 - - -
18 Hb_000329_680 0.2429361462 - - hypothetical protein JCGZ_14616 [Jatropha curcas]
19 Hb_000401_060 0.2429361462 - - PREDICTED: uncharacterized protein LOC105803540 [Gossypium raimondii]
20 Hb_000603_090 0.2429361462 - - -

Gene co-expression network

sample Hb_027751_050 Hb_027751_050 Hb_002073_070 Hb_002073_070 Hb_027751_050--Hb_002073_070 Hb_002595_100 Hb_002595_100 Hb_027751_050--Hb_002595_100 Hb_002900_060 Hb_002900_060 Hb_027751_050--Hb_002900_060 Hb_013394_090 Hb_013394_090 Hb_027751_050--Hb_013394_090 Hb_000861_090 Hb_000861_090 Hb_027751_050--Hb_000861_090 Hb_000005_120 Hb_000005_120 Hb_027751_050--Hb_000005_120 Hb_002073_070--Hb_000005_120 Hb_000011_130 Hb_000011_130 Hb_002073_070--Hb_000011_130 Hb_000046_140 Hb_000046_140 Hb_002073_070--Hb_000046_140 Hb_000081_070 Hb_000081_070 Hb_002073_070--Hb_000081_070 Hb_000171_010 Hb_000171_010 Hb_002073_070--Hb_000171_010 Hb_000189_040 Hb_000189_040 Hb_002073_070--Hb_000189_040 Hb_002595_100--Hb_002900_060 Hb_002260_190 Hb_002260_190 Hb_002595_100--Hb_002260_190 Hb_002022_050 Hb_002022_050 Hb_002595_100--Hb_002022_050 Hb_002595_100--Hb_002073_070 Hb_000005_040 Hb_000005_040 Hb_002595_100--Hb_000005_040 Hb_005730_080 Hb_005730_080 Hb_002595_100--Hb_005730_080 Hb_002900_060--Hb_000005_040 Hb_002900_060--Hb_002260_190 Hb_002900_060--Hb_002022_050 Hb_002900_060--Hb_002073_070 Hb_002232_200 Hb_002232_200 Hb_002900_060--Hb_002232_200 Hb_013394_090--Hb_005730_080 Hb_013394_090--Hb_002595_100 Hb_002890_190 Hb_002890_190 Hb_013394_090--Hb_002890_190 Hb_116436_010 Hb_116436_010 Hb_013394_090--Hb_116436_010 Hb_013394_090--Hb_002073_070 Hb_013394_090--Hb_000005_040 Hb_000861_090--Hb_000005_120 Hb_000861_090--Hb_000011_130 Hb_000861_090--Hb_000046_140 Hb_000861_090--Hb_000081_070 Hb_000861_090--Hb_000171_010 Hb_000861_090--Hb_000189_040 Hb_000005_120--Hb_000011_130 Hb_000005_120--Hb_000046_140 Hb_000005_120--Hb_000081_070 Hb_000005_120--Hb_000171_010 Hb_000005_120--Hb_000189_040 Hb_000210_170 Hb_000210_170 Hb_000005_120--Hb_000210_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0109357 0.762953 0.0269387
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0114716 0.0270832 0.0173264 0.00357651 0

CAGE analysis