Hb_028486_030

Information

Type -
Description -
Location Contig28486: 17708-18439
Sequence    

Annotation

kegg
ID rcu:RCOM_1281850
description hypothetical protein
nr
ID KDP34425.1
description hypothetical protein JCGZ_12706 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KQ46
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12706 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_028486_030 0.0 - - hypothetical protein JCGZ_12706 [Jatropha curcas]
2 Hb_000680_140 0.0876078856 - - PREDICTED: uncharacterized protein LOC105631472 isoform X1 [Jatropha curcas]
3 Hb_000962_040 0.08955783 - - heat shock protein binding protein, putative [Ricinus communis]
4 Hb_004846_090 0.0904860104 transcription factor TF Family: HMG HMG-box DNA-binding family protein isoform 1 [Theobroma cacao]
5 Hb_007220_010 0.0909669548 - - PREDICTED: methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Jatropha curcas]
6 Hb_026549_040 0.0914321108 - - PREDICTED: protein SLOW GREEN 1, chloroplastic [Jatropha curcas]
7 Hb_012675_050 0.0916201844 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002235_350 0.0926519853 - - PREDICTED: uncharacterized protein LOC105635929 [Jatropha curcas]
9 Hb_000614_220 0.0944957556 - - PREDICTED: uncharacterized protein LOC105644756 [Jatropha curcas]
10 Hb_027654_060 0.095120272 - - RecName: Full=Probable pyridoxal 5'-phosphate synthase subunit PDX1; Short=PLP synthase subunit PDX1; AltName: Full=Ethylene-inducible protein HEVER [Hevea brasiliensis]
11 Hb_153112_030 0.0958639874 - - PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Jatropha curcas]
12 Hb_003683_120 0.0968361991 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001427_200 0.0998984281 - - PREDICTED: uncharacterized protein LOC105637796 [Jatropha curcas]
14 Hb_004586_170 0.1020021186 - - hypothetical protein PRUPE_ppa011196mg [Prunus persica]
15 Hb_001780_040 0.1021004888 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM10 [Jatropha curcas]
16 Hb_000046_050 0.1030503596 - - PREDICTED: LEC14B homolog [Jatropha curcas]
17 Hb_000169_040 0.10490929 - - PREDICTED: stress response protein nst1-like [Jatropha curcas]
18 Hb_000979_200 0.1053475598 - - PREDICTED: uncharacterized protein LOC105634088 [Jatropha curcas]
19 Hb_011671_390 0.1061829001 - - peptide methionine sulfoxide reductase A1-like [Jatropha curcas]
20 Hb_011909_100 0.1066720981 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_028486_030 Hb_028486_030 Hb_000680_140 Hb_000680_140 Hb_028486_030--Hb_000680_140 Hb_000962_040 Hb_000962_040 Hb_028486_030--Hb_000962_040 Hb_004846_090 Hb_004846_090 Hb_028486_030--Hb_004846_090 Hb_007220_010 Hb_007220_010 Hb_028486_030--Hb_007220_010 Hb_026549_040 Hb_026549_040 Hb_028486_030--Hb_026549_040 Hb_012675_050 Hb_012675_050 Hb_028486_030--Hb_012675_050 Hb_004459_040 Hb_004459_040 Hb_000680_140--Hb_004459_040 Hb_153112_030 Hb_153112_030 Hb_000680_140--Hb_153112_030 Hb_007576_170 Hb_007576_170 Hb_000680_140--Hb_007576_170 Hb_006541_010 Hb_006541_010 Hb_000680_140--Hb_006541_010 Hb_001616_040 Hb_001616_040 Hb_000680_140--Hb_001616_040 Hb_000668_040 Hb_000668_040 Hb_000680_140--Hb_000668_040 Hb_004324_270 Hb_004324_270 Hb_000962_040--Hb_004324_270 Hb_000614_220 Hb_000614_220 Hb_000962_040--Hb_000614_220 Hb_027654_060 Hb_027654_060 Hb_000962_040--Hb_027654_060 Hb_011909_100 Hb_011909_100 Hb_000962_040--Hb_011909_100 Hb_000853_190 Hb_000853_190 Hb_000962_040--Hb_000853_190 Hb_000453_090 Hb_000453_090 Hb_004846_090--Hb_000453_090 Hb_011671_390 Hb_011671_390 Hb_004846_090--Hb_011671_390 Hb_004846_090--Hb_004459_040 Hb_001780_040 Hb_001780_040 Hb_004846_090--Hb_001780_040 Hb_000840_180 Hb_000840_180 Hb_004846_090--Hb_000840_180 Hb_000169_040 Hb_000169_040 Hb_007220_010--Hb_000169_040 Hb_007304_090 Hb_007304_090 Hb_007220_010--Hb_007304_090 Hb_007220_010--Hb_000840_180 Hb_001318_260 Hb_001318_260 Hb_007220_010--Hb_001318_260 Hb_000327_060 Hb_000327_060 Hb_007220_010--Hb_000327_060 Hb_002942_190 Hb_002942_190 Hb_026549_040--Hb_002942_190 Hb_001292_020 Hb_001292_020 Hb_026549_040--Hb_001292_020 Hb_000479_090 Hb_000479_090 Hb_026549_040--Hb_000479_090 Hb_002686_020 Hb_002686_020 Hb_026549_040--Hb_002686_020 Hb_000384_100 Hb_000384_100 Hb_026549_040--Hb_000384_100 Hb_026549_040--Hb_012675_050 Hb_012675_050--Hb_011909_100 Hb_000107_160 Hb_000107_160 Hb_012675_050--Hb_000107_160 Hb_000061_210 Hb_000061_210 Hb_012675_050--Hb_000061_210 Hb_000046_050 Hb_000046_050 Hb_012675_050--Hb_000046_050 Hb_103118_010 Hb_103118_010 Hb_012675_050--Hb_103118_010 Hb_002408_020 Hb_002408_020 Hb_012675_050--Hb_002408_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.6947 6.15925 8.41298 4.14566 6.72544 8.0788
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.8753 27.1502 14.6909 5.05154 12.9609

CAGE analysis