Hb_028811_010

Information

Type -
Description -
Location Contig28811: 27150-32808
Sequence    

Annotation

kegg
ID pda:103723977
description uncharacterized LOC103723977
nr
ID XP_012092448.1
description PREDICTED: uncharacterized protein LOC105650178 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L819
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19753 PE=4 SV=1
Gene Ontology
ID GO:0006950
description PREDICTED: uncharacterized protein LOC105650178 isoform X1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30084: 27992-32750
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_028811_010 0.0 - - PREDICTED: uncharacterized protein LOC105650178 isoform X1 [Jatropha curcas]
2 Hb_001486_030 0.1107758921 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001623_160 0.1301220849 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 [Jatropha curcas]
4 Hb_001214_090 0.1407968 - - PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal [Jatropha curcas]
5 Hb_000414_110 0.1453787892 - - PREDICTED: MATE efflux family protein 5 isoform X1 [Populus euphratica]
6 Hb_011909_010 0.1461879075 - - PREDICTED: uncharacterized protein LOC100246941 [Vitis vinifera]
7 Hb_004064_010 0.1485795926 - - PREDICTED: uncharacterized protein LOC105133340 isoform X1 [Populus euphratica]
8 Hb_119494_010 0.1518174308 - - PREDICTED: box C/D snoRNA protein 1 [Jatropha curcas]
9 Hb_002291_010 0.1532388072 - - ring finger protein, putative [Ricinus communis]
10 Hb_008864_090 0.1557388213 - - PREDICTED: plastid division protein PDV2-like [Jatropha curcas]
11 Hb_014894_010 0.1579080283 - - hypothetical protein CICLE_v10001869mg [Citrus clementina]
12 Hb_002005_100 0.1582173844 - - -
13 Hb_000417_320 0.1592403789 - - hypothetical protein CICLE_v10000333mg [Citrus clementina]
14 Hb_082741_010 0.1594666608 - - PREDICTED: uncharacterized protein LOC105649930 [Jatropha curcas]
15 Hb_108329_020 0.1628077688 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
16 Hb_010029_020 0.1640376524 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
17 Hb_001341_100 0.1657609806 - - hypothetical protein JCGZ_05568 [Jatropha curcas]
18 Hb_000227_040 0.166293452 - - Stem-specific protein TSJT1, putative [Ricinus communis]
19 Hb_012545_090 0.1673313144 - - hypothetical protein JCGZ_04320 [Jatropha curcas]
20 Hb_002153_030 0.1682515452 - - E3 ubiquitin-protein ligase UPL5 [Theobroma cacao]

Gene co-expression network

sample Hb_028811_010 Hb_028811_010 Hb_001486_030 Hb_001486_030 Hb_028811_010--Hb_001486_030 Hb_001623_160 Hb_001623_160 Hb_028811_010--Hb_001623_160 Hb_001214_090 Hb_001214_090 Hb_028811_010--Hb_001214_090 Hb_000414_110 Hb_000414_110 Hb_028811_010--Hb_000414_110 Hb_011909_010 Hb_011909_010 Hb_028811_010--Hb_011909_010 Hb_004064_010 Hb_004064_010 Hb_028811_010--Hb_004064_010 Hb_001341_100 Hb_001341_100 Hb_001486_030--Hb_001341_100 Hb_001486_030--Hb_004064_010 Hb_109002_020 Hb_109002_020 Hb_001486_030--Hb_109002_020 Hb_119494_010 Hb_119494_010 Hb_001486_030--Hb_119494_010 Hb_003442_070 Hb_003442_070 Hb_001486_030--Hb_003442_070 Hb_001623_160--Hb_001214_090 Hb_000381_110 Hb_000381_110 Hb_001623_160--Hb_000381_110 Hb_003038_140 Hb_003038_140 Hb_001623_160--Hb_003038_140 Hb_001971_060 Hb_001971_060 Hb_001623_160--Hb_001971_060 Hb_004079_080 Hb_004079_080 Hb_001623_160--Hb_004079_080 Hb_001332_040 Hb_001332_040 Hb_001623_160--Hb_001332_040 Hb_016522_010 Hb_016522_010 Hb_001214_090--Hb_016522_010 Hb_010863_010 Hb_010863_010 Hb_001214_090--Hb_010863_010 Hb_000190_090 Hb_000190_090 Hb_001214_090--Hb_000190_090 Hb_001214_090--Hb_119494_010 Hb_003266_100 Hb_003266_100 Hb_001214_090--Hb_003266_100 Hb_000417_320 Hb_000417_320 Hb_000414_110--Hb_000417_320 Hb_000165_210 Hb_000165_210 Hb_000414_110--Hb_000165_210 Hb_000808_170 Hb_000808_170 Hb_000414_110--Hb_000808_170 Hb_000061_090 Hb_000061_090 Hb_000414_110--Hb_000061_090 Hb_002291_010 Hb_002291_010 Hb_000414_110--Hb_002291_010 Hb_000345_320 Hb_000345_320 Hb_011909_010--Hb_000345_320 Hb_000317_350 Hb_000317_350 Hb_011909_010--Hb_000317_350 Hb_000209_100 Hb_000209_100 Hb_011909_010--Hb_000209_100 Hb_082741_010 Hb_082741_010 Hb_011909_010--Hb_082741_010 Hb_000205_250 Hb_000205_250 Hb_011909_010--Hb_000205_250 Hb_004064_010--Hb_003266_100 Hb_105602_010 Hb_105602_010 Hb_004064_010--Hb_105602_010 Hb_000621_020 Hb_000621_020 Hb_004064_010--Hb_000621_020 Hb_004064_010--Hb_109002_020 Hb_004064_010--Hb_001341_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.35561 15.4225 7.63839 7.34005 2.20114 5.62703
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.17759 8.28261 16.6668 40.4567 7.73092

CAGE analysis