Hb_029584_120

Information

Type -
Description -
Location Contig29584: 62904-72493
Sequence    

Annotation

kegg
ID vvi:100252607
description K(+) efflux antiporter 4
nr
ID XP_012076898.1
description PREDICTED: K(+) efflux antiporter 4 isoform X1 [Jatropha curcas]
swissprot
ID Q9ZUN3
description K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2
trembl
ID A0A067KC74
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07387 PE=4 SV=1
Gene Ontology
ID GO:0016021
description k(+) efflux antiporter 4-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30927: 62887-72393 , PASA_asmbl_30928: 65454-66876
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029584_120 0.0 - - PREDICTED: K(+) efflux antiporter 4 isoform X1 [Jatropha curcas]
2 Hb_000001_090 0.0624192547 - - PREDICTED: uncharacterized protein At3g58460 [Populus euphratica]
3 Hb_000258_220 0.0701744142 - - PREDICTED: probable methyltransferase PMT2 isoform X2 [Jatropha curcas]
4 Hb_074399_010 0.080997335 - - PREDICTED: phragmoplast orienting kinesin-1 isoform X1 [Populus euphratica]
5 Hb_004724_390 0.0846309557 - - PREDICTED: nicalin-1-like [Populus euphratica]
6 Hb_000866_070 0.0871457741 - - PREDICTED: LOW QUALITY PROTEIN: SKP1-like protein 21 [Jatropha curcas]
7 Hb_002942_230 0.0934950786 - - PREDICTED: long chain base biosynthesis protein 2a [Populus euphratica]
8 Hb_000134_120 0.0966292345 - - PREDICTED: uncharacterized protein LOC105628669 [Jatropha curcas]
9 Hb_000497_190 0.1004075226 - - sterol isomerase, putative [Ricinus communis]
10 Hb_007919_110 0.1004807723 - - PREDICTED: UDP-galactose transporter 2-like [Jatropha curcas]
11 Hb_005511_130 0.1036446129 - - PREDICTED: transmembrane protein 115-like [Populus euphratica]
12 Hb_000753_160 0.1062775795 - - PREDICTED: uncharacterized protein LOC105640669 [Jatropha curcas]
13 Hb_006588_160 0.1071568003 - - PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic isoform X2 [Jatropha curcas]
14 Hb_002045_170 0.108379027 - - interferon-induced guanylate-binding protein, putative [Ricinus communis]
15 Hb_004013_030 0.1100439584 - - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative [Ricinus communis]
16 Hb_003687_080 0.1104225296 - - PREDICTED: casein kinase I-like [Jatropha curcas]
17 Hb_002217_080 0.1104460882 - - PREDICTED: probable beta-1,3-galactosyltransferase 16 [Jatropha curcas]
18 Hb_012760_030 0.1114295828 - - PREDICTED: probable prolyl 4-hydroxylase 10 [Gossypium raimondii]
19 Hb_000154_050 0.1128988928 - - CMP-sialic acid transporter, putative [Ricinus communis]
20 Hb_000054_040 0.1132035974 - - PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Jatropha curcas]

Gene co-expression network

sample Hb_029584_120 Hb_029584_120 Hb_000001_090 Hb_000001_090 Hb_029584_120--Hb_000001_090 Hb_000258_220 Hb_000258_220 Hb_029584_120--Hb_000258_220 Hb_074399_010 Hb_074399_010 Hb_029584_120--Hb_074399_010 Hb_004724_390 Hb_004724_390 Hb_029584_120--Hb_004724_390 Hb_000866_070 Hb_000866_070 Hb_029584_120--Hb_000866_070 Hb_002942_230 Hb_002942_230 Hb_029584_120--Hb_002942_230 Hb_000001_090--Hb_000866_070 Hb_006588_160 Hb_006588_160 Hb_000001_090--Hb_006588_160 Hb_000001_090--Hb_002942_230 Hb_003687_080 Hb_003687_080 Hb_000001_090--Hb_003687_080 Hb_000001_090--Hb_074399_010 Hb_000134_120 Hb_000134_120 Hb_000258_220--Hb_000134_120 Hb_000503_020 Hb_000503_020 Hb_000258_220--Hb_000503_020 Hb_000258_220--Hb_074399_010 Hb_000054_040 Hb_000054_040 Hb_000258_220--Hb_000054_040 Hb_003540_080 Hb_003540_080 Hb_000258_220--Hb_003540_080 Hb_000703_160 Hb_000703_160 Hb_074399_010--Hb_000703_160 Hb_074399_010--Hb_003687_080 Hb_007919_110 Hb_007919_110 Hb_074399_010--Hb_007919_110 Hb_004013_030 Hb_004013_030 Hb_074399_010--Hb_004013_030 Hb_002045_170 Hb_002045_170 Hb_004724_390--Hb_002045_170 Hb_002687_180 Hb_002687_180 Hb_004724_390--Hb_002687_180 Hb_000497_190 Hb_000497_190 Hb_004724_390--Hb_000497_190 Hb_000317_110 Hb_000317_110 Hb_004724_390--Hb_000317_110 Hb_004228_120 Hb_004228_120 Hb_004724_390--Hb_004228_120 Hb_012760_030 Hb_012760_030 Hb_004724_390--Hb_012760_030 Hb_000866_070--Hb_002942_230 Hb_000968_060 Hb_000968_060 Hb_000866_070--Hb_000968_060 Hb_001411_130 Hb_001411_130 Hb_000866_070--Hb_001411_130 Hb_002217_080 Hb_002217_080 Hb_000866_070--Hb_002217_080 Hb_002942_230--Hb_002217_080 Hb_002942_230--Hb_001411_130 Hb_002687_200 Hb_002687_200 Hb_002942_230--Hb_002687_200 Hb_002942_230--Hb_003540_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.09448 6.36362 17.5862 20.2212 7.5944 3.98085
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.33965 3.08366 3.00647 6.92556 9.33897

CAGE analysis