Hb_029587_010

Information

Type -
Description -
Location Contig29587: 59-646
Sequence    

Annotation

kegg
ID egr:104447401
description G-type lectin S-receptor-like serine/threonine-protein kinase RKS1
nr
ID KHN45738.1
description G-type lectin S-receptor-like serine/threonine-protein kinase [Glycine soja]
swissprot
ID O81905
description Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1
trembl
ID A0A0B2SLN0
description G-type lectin S-receptor-like serine/threonine-protein kinase OS=Glycine soja GN=glysoja_043682 PE=4 SV=1
Gene Ontology
ID GO:0016772
description g-type lectin s-receptor-like serine threonine-protein kinase rks1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029587_010 0.0 - - G-type lectin S-receptor-like serine/threonine-protein kinase [Glycine soja]
2 Hb_010589_010 0.0569119154 - - PREDICTED: classical arabinogalactan protein 9-like [Jatropha curcas]
3 Hb_003549_100 0.0650850734 - - PREDICTED: uncharacterized protein LOC105647410 [Jatropha curcas]
4 Hb_002477_190 0.067489934 - - hypothetical protein EUGRSUZ_C03380, partial [Eucalyptus grandis]
5 Hb_001711_140 0.0682741064 - - Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis]
6 Hb_144550_010 0.0682821937 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
7 Hb_001397_020 0.0703406879 - - cytochrome P450 family protein [Populus trichocarpa]
8 Hb_095744_010 0.0789270924 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 [Fragaria vesca subsp. vesca]
9 Hb_000917_300 0.0792226936 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Populus euphratica]
10 Hb_132880_010 0.0866528186 - - PREDICTED: uncharacterized protein LOC105641595 [Jatropha curcas]
11 Hb_008518_060 0.0875566695 - - PREDICTED: long chain acyl-CoA synthetase 1 [Jatropha curcas]
12 Hb_000002_110 0.0877554821 - - hypothetical protein EUGRSUZ_B02140 [Eucalyptus grandis]
13 Hb_000172_270 0.0891439748 - - hypothetical protein JCGZ_24087 [Jatropha curcas]
14 Hb_001433_090 0.092580276 - - Pectinesterase PPE8B precursor, putative [Ricinus communis]
15 Hb_138977_010 0.0938403298 - - unnamed protein product [Vitis vinifera]
16 Hb_000023_100 0.0948681746 - - Mechanosensitive channel of small conductance-like 10 [Theobroma cacao]
17 Hb_001500_130 0.096912559 - - interferon-induced GTP-binding protein mx, putative [Ricinus communis]
18 Hb_000029_210 0.097484969 - - protein binding protein, putative [Ricinus communis]
19 Hb_001048_010 0.0981419707 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 7 [Jatropha curcas]
20 Hb_005062_100 0.0989945443 - - Ferredoxin-2, chloroplast precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_029587_010 Hb_029587_010 Hb_010589_010 Hb_010589_010 Hb_029587_010--Hb_010589_010 Hb_003549_100 Hb_003549_100 Hb_029587_010--Hb_003549_100 Hb_002477_190 Hb_002477_190 Hb_029587_010--Hb_002477_190 Hb_001711_140 Hb_001711_140 Hb_029587_010--Hb_001711_140 Hb_144550_010 Hb_144550_010 Hb_029587_010--Hb_144550_010 Hb_001397_020 Hb_001397_020 Hb_029587_010--Hb_001397_020 Hb_010589_010--Hb_001397_020 Hb_001433_090 Hb_001433_090 Hb_010589_010--Hb_001433_090 Hb_010589_010--Hb_003549_100 Hb_000002_110 Hb_000002_110 Hb_010589_010--Hb_000002_110 Hb_001500_130 Hb_001500_130 Hb_010589_010--Hb_001500_130 Hb_003549_100--Hb_001397_020 Hb_132880_010 Hb_132880_010 Hb_003549_100--Hb_132880_010 Hb_002809_180 Hb_002809_180 Hb_003549_100--Hb_002809_180 Hb_095744_010 Hb_095744_010 Hb_003549_100--Hb_095744_010 Hb_002477_190--Hb_001711_140 Hb_005010_030 Hb_005010_030 Hb_002477_190--Hb_005010_030 Hb_006615_090 Hb_006615_090 Hb_002477_190--Hb_006615_090 Hb_001199_110 Hb_001199_110 Hb_002477_190--Hb_001199_110 Hb_002477_190--Hb_144550_010 Hb_001711_140--Hb_005010_030 Hb_009315_010 Hb_009315_010 Hb_001711_140--Hb_009315_010 Hb_000462_010 Hb_000462_010 Hb_001711_140--Hb_000462_010 Hb_005843_010 Hb_005843_010 Hb_001711_140--Hb_005843_010 Hb_144550_010--Hb_132880_010 Hb_001472_150 Hb_001472_150 Hb_144550_010--Hb_001472_150 Hb_001593_040 Hb_001593_040 Hb_144550_010--Hb_001593_040 Hb_144550_010--Hb_095744_010 Hb_064445_020 Hb_064445_020 Hb_144550_010--Hb_064445_020 Hb_001397_020--Hb_002809_180 Hb_003152_020 Hb_003152_020 Hb_001397_020--Hb_003152_020 Hb_010883_160 Hb_010883_160 Hb_001397_020--Hb_010883_160 Hb_001397_020--Hb_000002_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0760147 0.414388 1.3261 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.69151

CAGE analysis