Hb_029866_030

Information

Type -
Description -
Location Contig29866: 27253-28854
Sequence    

Annotation

kegg
ID cic:CICLE_v10006898mg
description hypothetical protein
nr
ID XP_006422114.1
description hypothetical protein CICLE_v10006898mg [Citrus clementina]
swissprot
ID Q94DB8
description Inorganic phosphate transporter 1-11 OS=Oryza sativa subsp. japonica GN=PHT1-11 PE=2 SV=1
trembl
ID K9MW18
description Phosphate transporter OS=Poncirus trifoliata GN=PT4 PE=2 SV=1
Gene Ontology
ID GO:0016021
description inorganic phosphate transporter 1-11-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029866_030 0.0 - - hypothetical protein CICLE_v10006898mg [Citrus clementina]
2 Hb_002073_120 0.2630507029 - - Adenine nucleotide alpha hydrolases-like superfamily protein [Theobroma cacao]
3 Hb_003333_050 0.2678256882 - - hypothetical protein JCGZ_20906 [Jatropha curcas]
4 Hb_000964_060 0.2686930158 - - hypothetical protein POPTR_0009s06660g [Populus trichocarpa]
5 Hb_000077_060 0.2687616249 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH36-like [Jatropha curcas]
6 Hb_012053_060 0.2704596665 - - PREDICTED: BTB/POZ domain-containing protein At3g44820 isoform X2 [Jatropha curcas]
7 Hb_006280_010 0.2793679549 transcription factor TF Family: ERF PREDICTED: AP2-like ethylene-responsive transcription factor TOE3 isoform X2 [Jatropha curcas]
8 Hb_000172_570 0.2799576505 - - PREDICTED: uncharacterized protein LOC105636518 isoform X1 [Jatropha curcas]
9 Hb_001780_120 0.2827714385 - - PREDICTED: uncharacterized protein LOC105634429 [Jatropha curcas]
10 Hb_000538_180 0.2850034271 - - PREDICTED: probable polyamine oxidase 4 [Jatropha curcas]
11 Hb_119504_010 0.2878582209 - - hypothetical protein JCGZ_15304 [Jatropha curcas]
12 Hb_004208_100 0.2885259915 - - Ribosomal protein L3 plastid isoform 1 [Theobroma cacao]
13 Hb_001114_340 0.2906088243 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
14 Hb_025311_020 0.2918804445 - - PREDICTED: uncharacterized protein LOC105039527 [Elaeis guineensis]
15 Hb_000226_100 0.2923336331 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
16 Hb_001780_140 0.2936426267 - - Uncharacterized protein isoform 1 [Theobroma cacao]
17 Hb_009615_080 0.2956611645 - - hypothetical protein JCGZ_24461 [Jatropha curcas]
18 Hb_007181_020 0.2967920984 - - PREDICTED: uncharacterized protein At4g04980-like [Populus euphratica]
19 Hb_001842_130 0.301015514 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001277_090 0.306102329 - - PREDICTED: uncharacterized protein LOC105632061 [Jatropha curcas]

Gene co-expression network

sample Hb_029866_030 Hb_029866_030 Hb_002073_120 Hb_002073_120 Hb_029866_030--Hb_002073_120 Hb_003333_050 Hb_003333_050 Hb_029866_030--Hb_003333_050 Hb_000964_060 Hb_000964_060 Hb_029866_030--Hb_000964_060 Hb_000077_060 Hb_000077_060 Hb_029866_030--Hb_000077_060 Hb_012053_060 Hb_012053_060 Hb_029866_030--Hb_012053_060 Hb_006280_010 Hb_006280_010 Hb_029866_030--Hb_006280_010 Hb_000172_570 Hb_000172_570 Hb_002073_120--Hb_000172_570 Hb_010417_010 Hb_010417_010 Hb_002073_120--Hb_010417_010 Hb_000995_070 Hb_000995_070 Hb_002073_120--Hb_000995_070 Hb_004208_100 Hb_004208_100 Hb_002073_120--Hb_004208_100 Hb_000009_070 Hb_000009_070 Hb_002073_120--Hb_000009_070 Hb_000141_240 Hb_000141_240 Hb_002073_120--Hb_000141_240 Hb_001222_050 Hb_001222_050 Hb_003333_050--Hb_001222_050 Hb_000010_410 Hb_000010_410 Hb_003333_050--Hb_000010_410 Hb_001277_090 Hb_001277_090 Hb_003333_050--Hb_001277_090 Hb_000130_110 Hb_000130_110 Hb_003333_050--Hb_000130_110 Hb_005224_010 Hb_005224_010 Hb_003333_050--Hb_005224_010 Hb_011316_020 Hb_011316_020 Hb_003333_050--Hb_011316_020 Hb_023732_040 Hb_023732_040 Hb_000964_060--Hb_023732_040 Hb_000964_060--Hb_002073_120 Hb_074238_010 Hb_074238_010 Hb_000964_060--Hb_074238_010 Hb_000964_060--Hb_003333_050 Hb_000964_060--Hb_006280_010 Hb_006153_080 Hb_006153_080 Hb_000077_060--Hb_006153_080 Hb_008760_010 Hb_008760_010 Hb_000077_060--Hb_008760_010 Hb_007747_180 Hb_007747_180 Hb_000077_060--Hb_007747_180 Hb_004020_060 Hb_004020_060 Hb_000077_060--Hb_004020_060 Hb_005408_050 Hb_005408_050 Hb_000077_060--Hb_005408_050 Hb_002046_070 Hb_002046_070 Hb_000077_060--Hb_002046_070 Hb_000538_180 Hb_000538_180 Hb_012053_060--Hb_000538_180 Hb_001780_140 Hb_001780_140 Hb_012053_060--Hb_001780_140 Hb_012053_060--Hb_002046_070 Hb_004032_260 Hb_004032_260 Hb_012053_060--Hb_004032_260 Hb_117807_010 Hb_117807_010 Hb_012053_060--Hb_117807_010 Hb_000140_360 Hb_000140_360 Hb_012053_060--Hb_000140_360 Hb_004460_010 Hb_004460_010 Hb_006280_010--Hb_004460_010 Hb_001035_070 Hb_001035_070 Hb_006280_010--Hb_001035_070 Hb_002513_030 Hb_002513_030 Hb_006280_010--Hb_002513_030 Hb_000213_080 Hb_000213_080 Hb_006280_010--Hb_000213_080 Hb_177179_010 Hb_177179_010 Hb_006280_010--Hb_177179_010 Hb_006280_010--Hb_001277_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0194368 0.0385932 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0579235 0.0455715 0.47205 0.0817856 0.0477952

CAGE analysis