Hb_029866_080

Information

Type -
Description -
Location Contig29866: 58568-60876
Sequence    

Annotation

kegg
ID rcu:RCOM_1581290
description ATP binding protein, putative
nr
ID XP_012090129.1
description PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
swissprot
ID Q9SUQ3
description Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=2 SV=1
trembl
ID A0A067JHA6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26014 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable inactive receptor kinase at4g23740

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31212: 58369-58610 , PASA_asmbl_31213: 60638-60819 , PASA_asmbl_31214: 60757-61239
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029866_080 0.0 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
2 Hb_001564_090 0.0939814103 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002289_110 0.1109849272 - - PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Jatropha curcas]
4 Hb_012787_050 0.113608445 - - PREDICTED: glutathione S-transferase U18-like [Jatropha curcas]
5 Hb_000070_070 0.1152161092 - - PREDICTED: protein LURP-one-related 17 [Jatropha curcas]
6 Hb_005489_120 0.1216958385 - - leucine rich repeat receptor kinase, putative [Ricinus communis]
7 Hb_005333_120 0.1217104436 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
8 Hb_001799_090 0.1229300301 - - PREDICTED: uclacyanin-2-like [Jatropha curcas]
9 Hb_001663_120 0.1242501651 - - PREDICTED: formin-like protein 1 isoform X1 [Jatropha curcas]
10 Hb_135720_010 0.1269884146 - - hypothetical protein JCGZ_17857 [Jatropha curcas]
11 Hb_003964_060 0.1311612317 - - PREDICTED: beta-glucosidase 40 [Jatropha curcas]
12 Hb_008727_040 0.1346778325 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003967_010 0.1363072538 - - cytochrome P450, putative [Ricinus communis]
14 Hb_085315_010 0.1387893496 - - PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
15 Hb_000069_520 0.1396153131 - - PREDICTED: transcription factor TRY-like [Jatropha curcas]
16 Hb_007161_020 0.1422388882 - - PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Jatropha curcas]
17 Hb_002374_060 0.1437024409 - - amino acid transporter, putative [Ricinus communis]
18 Hb_000676_170 0.144531217 - - PREDICTED: bifunctional epoxide hydrolase 2 [Jatropha curcas]
19 Hb_002042_160 0.1456916015 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
20 Hb_010162_010 0.1457857215 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]

Gene co-expression network

sample Hb_029866_080 Hb_029866_080 Hb_001564_090 Hb_001564_090 Hb_029866_080--Hb_001564_090 Hb_002289_110 Hb_002289_110 Hb_029866_080--Hb_002289_110 Hb_012787_050 Hb_012787_050 Hb_029866_080--Hb_012787_050 Hb_000070_070 Hb_000070_070 Hb_029866_080--Hb_000070_070 Hb_005489_120 Hb_005489_120 Hb_029866_080--Hb_005489_120 Hb_005333_120 Hb_005333_120 Hb_029866_080--Hb_005333_120 Hb_001663_120 Hb_001663_120 Hb_001564_090--Hb_001663_120 Hb_001564_090--Hb_005333_120 Hb_001564_090--Hb_012787_050 Hb_004462_040 Hb_004462_040 Hb_001564_090--Hb_004462_040 Hb_001799_090 Hb_001799_090 Hb_001564_090--Hb_001799_090 Hb_002289_110--Hb_001799_090 Hb_005237_070 Hb_005237_070 Hb_002289_110--Hb_005237_070 Hb_001856_160 Hb_001856_160 Hb_002289_110--Hb_001856_160 Hb_001998_260 Hb_001998_260 Hb_002289_110--Hb_001998_260 Hb_028008_030 Hb_028008_030 Hb_002289_110--Hb_028008_030 Hb_006846_030 Hb_006846_030 Hb_012787_050--Hb_006846_030 Hb_012787_050--Hb_000070_070 Hb_023956_010 Hb_023956_010 Hb_012787_050--Hb_023956_010 Hb_002333_010 Hb_002333_010 Hb_012787_050--Hb_002333_010 Hb_003847_050 Hb_003847_050 Hb_012787_050--Hb_003847_050 Hb_008727_040 Hb_008727_040 Hb_012787_050--Hb_008727_040 Hb_002236_010 Hb_002236_010 Hb_000070_070--Hb_002236_010 Hb_000070_070--Hb_023956_010 Hb_010417_090 Hb_010417_090 Hb_000070_070--Hb_010417_090 Hb_003964_060 Hb_003964_060 Hb_000070_070--Hb_003964_060 Hb_002553_070 Hb_002553_070 Hb_000070_070--Hb_002553_070 Hb_000300_170 Hb_000300_170 Hb_005489_120--Hb_000300_170 Hb_001053_110 Hb_001053_110 Hb_005489_120--Hb_001053_110 Hb_000676_170 Hb_000676_170 Hb_005489_120--Hb_000676_170 Hb_005489_120--Hb_001856_160 Hb_005489_120--Hb_012787_050 Hb_000022_280 Hb_000022_280 Hb_005489_120--Hb_000022_280 Hb_005333_120--Hb_004462_040 Hb_003435_070 Hb_003435_070 Hb_005333_120--Hb_003435_070 Hb_005333_120--Hb_001053_110 Hb_000417_350 Hb_000417_350 Hb_005333_120--Hb_000417_350 Hb_005333_120--Hb_002333_010 Hb_001856_150 Hb_001856_150 Hb_005333_120--Hb_001856_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0936775 1.68549 0.678405 4.97952 0.0622528 0.0179941
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0641134 0 0.0319291 3.8584 0.818521

CAGE analysis