Hb_029866_130

Information

Type -
Description -
Location Contig29866: 94702-97583
Sequence    

Annotation

kegg
ID rcu:RCOM_1581370
description hypothetical protein
nr
ID KDP20152.1
description hypothetical protein JCGZ_00035 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067J8T6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00035 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029866_130 0.0 - - hypothetical protein JCGZ_00035 [Jatropha curcas]
2 Hb_000152_890 0.0967048925 - - hypothetical protein JCGZ_26265 [Jatropha curcas]
3 Hb_001057_010 0.1009221909 - - cation-transporting atpase plant, putative [Ricinus communis]
4 Hb_006478_110 0.1041579603 - - type I inositol polyphosphate 5-phosphatase, putative [Ricinus communis]
5 Hb_001454_060 0.1046071287 - - uncharacterized protein LOC100527252 [Glycine max]
6 Hb_000413_130 0.1051373039 - - PREDICTED: uncharacterized protein LOC105649409 [Jatropha curcas]
7 Hb_005214_160 0.106337823 - - PREDICTED: heat shock 70 kDa protein, mitochondrial [Jatropha curcas]
8 Hb_000001_180 0.1079286652 - - PREDICTED: uncharacterized protein LOC105648978 [Jatropha curcas]
9 Hb_011671_330 0.1082826194 transcription factor TF Family: MYB-related PREDICTED: protein REVEILLE 4 [Jatropha curcas]
10 Hb_000106_040 0.1083701137 - - PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Vitis vinifera]
11 Hb_012654_010 0.1091693022 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105629849 [Jatropha curcas]
12 Hb_000152_560 0.1096812312 - - hypothetical protein JCGZ_26236 [Jatropha curcas]
13 Hb_001817_180 0.1109705678 - - PREDICTED: RING-H2 finger protein ATL47 [Jatropha curcas]
14 Hb_000906_060 0.1118561768 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g08820 [Populus euphratica]
15 Hb_000206_150 0.1122697076 - - unnamed protein product [Coffea canephora]
16 Hb_000161_030 0.1125684718 transcription factor TF Family: TCP PREDICTED: transcription factor TCP8 [Jatropha curcas]
17 Hb_000016_110 0.1159262614 - - PREDICTED: pentatricopeptide repeat-containing protein At4g38010 [Jatropha curcas]
18 Hb_000367_290 0.1172858727 - - PREDICTED: uncharacterized protein LOC105640583 [Jatropha curcas]
19 Hb_002341_030 0.1209698584 - - PREDICTED: transcription factor bHLH140 [Jatropha curcas]
20 Hb_002890_030 0.1210078613 desease resistance Gene Name: NB-ARC Disease resistance protein RGA2, putative [Ricinus communis]

Gene co-expression network

sample Hb_029866_130 Hb_029866_130 Hb_000152_890 Hb_000152_890 Hb_029866_130--Hb_000152_890 Hb_001057_010 Hb_001057_010 Hb_029866_130--Hb_001057_010 Hb_006478_110 Hb_006478_110 Hb_029866_130--Hb_006478_110 Hb_001454_060 Hb_001454_060 Hb_029866_130--Hb_001454_060 Hb_000413_130 Hb_000413_130 Hb_029866_130--Hb_000413_130 Hb_005214_160 Hb_005214_160 Hb_029866_130--Hb_005214_160 Hb_000367_290 Hb_000367_290 Hb_000152_890--Hb_000367_290 Hb_004032_350 Hb_004032_350 Hb_000152_890--Hb_004032_350 Hb_004724_360 Hb_004724_360 Hb_000152_890--Hb_004724_360 Hb_000001_180 Hb_000001_180 Hb_000152_890--Hb_000001_180 Hb_005314_010 Hb_005314_010 Hb_000152_890--Hb_005314_010 Hb_002133_030 Hb_002133_030 Hb_000152_890--Hb_002133_030 Hb_012654_010 Hb_012654_010 Hb_001057_010--Hb_012654_010 Hb_000340_510 Hb_000340_510 Hb_001057_010--Hb_000340_510 Hb_005237_010 Hb_005237_010 Hb_001057_010--Hb_005237_010 Hb_017168_010 Hb_017168_010 Hb_001057_010--Hb_017168_010 Hb_003097_190 Hb_003097_190 Hb_001057_010--Hb_003097_190 Hb_002942_220 Hb_002942_220 Hb_001057_010--Hb_002942_220 Hb_006478_110--Hb_000413_130 Hb_011671_330 Hb_011671_330 Hb_006478_110--Hb_011671_330 Hb_000161_030 Hb_000161_030 Hb_006478_110--Hb_000161_030 Hb_006478_110--Hb_001454_060 Hb_002341_030 Hb_002341_030 Hb_006478_110--Hb_002341_030 Hb_006478_110--Hb_012654_010 Hb_003494_240 Hb_003494_240 Hb_001454_060--Hb_003494_240 Hb_000608_120 Hb_000608_120 Hb_001454_060--Hb_000608_120 Hb_000078_130 Hb_000078_130 Hb_001454_060--Hb_000078_130 Hb_000703_080 Hb_000703_080 Hb_001454_060--Hb_000703_080 Hb_000172_400 Hb_000172_400 Hb_001454_060--Hb_000172_400 Hb_001817_180 Hb_001817_180 Hb_001454_060--Hb_001817_180 Hb_001431_070 Hb_001431_070 Hb_000413_130--Hb_001431_070 Hb_000413_130--Hb_005314_010 Hb_000413_130--Hb_000367_290 Hb_002725_070 Hb_002725_070 Hb_000413_130--Hb_002725_070 Hb_029281_010 Hb_029281_010 Hb_000413_130--Hb_029281_010 Hb_006091_030 Hb_006091_030 Hb_000413_130--Hb_006091_030 Hb_005214_160--Hb_012654_010 Hb_000977_180 Hb_000977_180 Hb_005214_160--Hb_000977_180 Hb_009620_040 Hb_009620_040 Hb_005214_160--Hb_009620_040 Hb_007364_010 Hb_007364_010 Hb_005214_160--Hb_007364_010 Hb_004567_100 Hb_004567_100 Hb_005214_160--Hb_004567_100 Hb_002097_090 Hb_002097_090 Hb_005214_160--Hb_002097_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.52145 1.34001 0.0790583 0.309513 2.9146 2.50797
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.900554 1.00692 1.27141 0.460141 0.275483

CAGE analysis