Hb_029879_060

Information

Type -
Description -
Location Contig29879: 53159-56276
Sequence    

Annotation

kegg
ID rcu:RCOM_0905310
description Adenosine deaminase, putative (EC:3.5.4.4)
nr
ID XP_012091381.1
description PREDICTED: adenosine deaminase-like protein [Jatropha curcas]
swissprot
ID Q0VC13
description Adenosine deaminase-like protein OS=Bos taurus GN=ADAL PE=2 SV=1
trembl
ID B9RXP2
description Adenosine deaminase, putative OS=Ricinus communis GN=RCOM_0905310 PE=4 SV=1
Gene Ontology
ID GO:0004000
description adenosine deaminase-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029879_060 0.0 - - PREDICTED: adenosine deaminase-like protein [Jatropha curcas]
2 Hb_001623_500 0.1238493362 - - PREDICTED: uncharacterized protein LOC105638487 [Jatropha curcas]
3 Hb_001143_100 0.1331132346 - - PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Populus euphratica]
4 Hb_000085_070 0.1359419024 - - PREDICTED: trigger factor-like protein TIG, Chloroplastic isoform X1 [Jatropha curcas]
5 Hb_001832_200 0.1370631423 - - PREDICTED: PCI domain-containing protein 2 isoform X1 [Jatropha curcas]
6 Hb_004109_260 0.1453451841 - - hypothetical protein JCGZ_06843 [Jatropha curcas]
7 Hb_001390_100 0.1467512882 - - PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Jatropha curcas]
8 Hb_000496_130 0.1474187205 - - PREDICTED: fructokinase-1 [Jatropha curcas]
9 Hb_025194_090 0.1478971164 - - coproporphyrinogen III oxidase, putative [Ricinus communis]
10 Hb_000480_040 0.1487635741 - - PREDICTED: L-Ala-D/L-amino acid epimerase isoform X2 [Jatropha curcas]
11 Hb_002075_030 0.1494486309 - - PREDICTED: glycerol-3-phosphate acyltransferase, chloroplastic [Jatropha curcas]
12 Hb_000309_020 0.1506691928 - - PREDICTED: uncharacterized protein LOC105641764 [Jatropha curcas]
13 Hb_000331_570 0.1507804503 - - PREDICTED: DNA-(apurinic or apyrimidinic site) lyase [Jatropha curcas]
14 Hb_002542_160 0.1512501835 - - PREDICTED: peptide chain release factor APG3, chloroplastic [Jatropha curcas]
15 Hb_001789_160 0.1514375113 - - PREDICTED: putative transporter arsB [Jatropha curcas]
16 Hb_001454_150 0.1528348746 - - isoleucyl tRNA synthetase, putative [Ricinus communis]
17 Hb_000620_020 0.1531636638 - - PREDICTED: uncharacterized protein LOC105649917 [Jatropha curcas]
18 Hb_003029_020 0.1546186529 - - ATP-dependent Clp protease proteolytic subunit, putative [Ricinus communis]
19 Hb_000613_120 0.1547848932 transcription factor TF Family: SET PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Jatropha curcas]
20 Hb_004502_010 0.1556163463 - - hypothetical protein JCGZ_23576 [Jatropha curcas]

Gene co-expression network

sample Hb_029879_060 Hb_029879_060 Hb_001623_500 Hb_001623_500 Hb_029879_060--Hb_001623_500 Hb_001143_100 Hb_001143_100 Hb_029879_060--Hb_001143_100 Hb_000085_070 Hb_000085_070 Hb_029879_060--Hb_000085_070 Hb_001832_200 Hb_001832_200 Hb_029879_060--Hb_001832_200 Hb_004109_260 Hb_004109_260 Hb_029879_060--Hb_004109_260 Hb_001390_100 Hb_001390_100 Hb_029879_060--Hb_001390_100 Hb_004339_040 Hb_004339_040 Hb_001623_500--Hb_004339_040 Hb_001623_500--Hb_001832_200 Hb_007199_020 Hb_007199_020 Hb_001623_500--Hb_007199_020 Hb_187247_020 Hb_187247_020 Hb_001623_500--Hb_187247_020 Hb_017193_010 Hb_017193_010 Hb_001623_500--Hb_017193_010 Hb_000579_080 Hb_000579_080 Hb_001623_500--Hb_000579_080 Hb_000496_130 Hb_000496_130 Hb_001143_100--Hb_000496_130 Hb_000579_040 Hb_000579_040 Hb_001143_100--Hb_000579_040 Hb_000510_190 Hb_000510_190 Hb_001143_100--Hb_000510_190 Hb_032631_070 Hb_032631_070 Hb_001143_100--Hb_032631_070 Hb_003355_010 Hb_003355_010 Hb_001143_100--Hb_003355_010 Hb_008375_010 Hb_008375_010 Hb_001143_100--Hb_008375_010 Hb_000108_020 Hb_000108_020 Hb_000085_070--Hb_000108_020 Hb_000309_020 Hb_000309_020 Hb_000085_070--Hb_000309_020 Hb_000480_040 Hb_000480_040 Hb_000085_070--Hb_000480_040 Hb_002542_160 Hb_002542_160 Hb_000085_070--Hb_002542_160 Hb_000085_070--Hb_003355_010 Hb_000220_210 Hb_000220_210 Hb_000085_070--Hb_000220_210 Hb_001105_040 Hb_001105_040 Hb_001832_200--Hb_001105_040 Hb_001882_010 Hb_001882_010 Hb_001832_200--Hb_001882_010 Hb_025194_050 Hb_025194_050 Hb_001832_200--Hb_025194_050 Hb_010863_050 Hb_010863_050 Hb_001832_200--Hb_010863_050 Hb_001832_200--Hb_000108_020 Hb_068079_010 Hb_068079_010 Hb_001832_200--Hb_068079_010 Hb_001824_080 Hb_001824_080 Hb_004109_260--Hb_001824_080 Hb_004109_260--Hb_004339_040 Hb_000802_130 Hb_000802_130 Hb_004109_260--Hb_000802_130 Hb_000613_120 Hb_000613_120 Hb_004109_260--Hb_000613_120 Hb_001438_010 Hb_001438_010 Hb_004109_260--Hb_001438_010 Hb_000880_070 Hb_000880_070 Hb_004109_260--Hb_000880_070 Hb_101334_020 Hb_101334_020 Hb_001390_100--Hb_101334_020 Hb_000116_250 Hb_000116_250 Hb_001390_100--Hb_000116_250 Hb_025194_090 Hb_025194_090 Hb_001390_100--Hb_025194_090 Hb_000094_100 Hb_000094_100 Hb_001390_100--Hb_000094_100 Hb_001390_100--Hb_000496_130 Hb_138585_030 Hb_138585_030 Hb_001390_100--Hb_138585_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.153345 0.506983 2.72025 0.712039 0.502324 0.881135
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.794912 0.535985 0.555526 1.33458 2.59637

CAGE analysis