Hb_029977_030

Information

Type transcription factor
Description TF Family: bZIP
Location Contig29977: 33664-35175
Sequence    

Annotation

kegg
ID rcu:RCOM_1280780
description hypothetical protein
nr
ID XP_002523794.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q8RYD6
description ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Arabidopsis thaliana GN=DPBF2 PE=1 SV=1
trembl
ID B9SCS5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1280780 PE=4 SV=1
Gene Ontology
ID GO:0005488
description abscisic acid-insensitive 5-like protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029977_030 0.0 transcription factor TF Family: bZIP conserved hypothetical protein [Ricinus communis]
2 Hb_006651_030 0.0454809836 - - unnamed protein product [Homo sapiens]
3 Hb_096027_010 0.0740444334 - - ankyrin repeat-containing protein, putative [Ricinus communis]
4 Hb_059275_010 0.0817643347 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
5 Hb_008895_020 0.0833990935 - - Phospho-N-acetylmuramoyl-pentapeptide-transferase, putative [Theobroma cacao]
6 Hb_011853_020 0.095232326 - - Gamma-glutamyl-gamma-aminobutyrate hydrolase, putative [Ricinus communis]
7 Hb_001715_060 0.0986561492 - - PREDICTED: gibberellin 3-beta-dioxygenase 1 [Jatropha curcas]
8 Hb_001766_130 0.0988205088 - - zinc finger protein, putative [Ricinus communis]
9 Hb_017383_010 0.101945667 - - PREDICTED: uncharacterized protein LOC105628176 [Jatropha curcas]
10 Hb_000077_280 0.1077137417 - - ankyrin repeat-containing protein, putative [Ricinus communis]
11 Hb_010449_010 0.1080775584 - - l-ascorbate oxidase, putative [Ricinus communis]
12 Hb_001794_040 0.1107688792 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH63 isoform X1 [Jatropha curcas]
13 Hb_011574_020 0.1113742618 - - hypothetical protein JCGZ_21524 [Jatropha curcas]
14 Hb_000103_220 0.1135404147 - - PREDICTED: uncharacterized protein LOC105632036 [Jatropha curcas]
15 Hb_020738_010 0.1148421303 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
16 Hb_001638_340 0.1164431231 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004137_110 0.1225339831 - - PREDICTED: probable auxin efflux carrier component 6 [Jatropha curcas]
18 Hb_011909_050 0.1236826753 - - PREDICTED: calcium-binding protein PBP1 [Jatropha curcas]
19 Hb_017434_010 0.1245326634 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
20 Hb_001117_050 0.1245495035 - - E3 ubiquitin-protein ligase UPL5 [Theobroma cacao]

Gene co-expression network

sample Hb_029977_030 Hb_029977_030 Hb_006651_030 Hb_006651_030 Hb_029977_030--Hb_006651_030 Hb_096027_010 Hb_096027_010 Hb_029977_030--Hb_096027_010 Hb_059275_010 Hb_059275_010 Hb_029977_030--Hb_059275_010 Hb_008895_020 Hb_008895_020 Hb_029977_030--Hb_008895_020 Hb_011853_020 Hb_011853_020 Hb_029977_030--Hb_011853_020 Hb_001715_060 Hb_001715_060 Hb_029977_030--Hb_001715_060 Hb_006651_030--Hb_008895_020 Hb_011909_050 Hb_011909_050 Hb_006651_030--Hb_011909_050 Hb_008406_060 Hb_008406_060 Hb_006651_030--Hb_008406_060 Hb_001766_130 Hb_001766_130 Hb_006651_030--Hb_001766_130 Hb_161103_010 Hb_161103_010 Hb_006651_030--Hb_161103_010 Hb_096027_010--Hb_011853_020 Hb_011618_110 Hb_011618_110 Hb_096027_010--Hb_011618_110 Hb_096027_010--Hb_001766_130 Hb_002636_120 Hb_002636_120 Hb_096027_010--Hb_002636_120 Hb_000230_300 Hb_000230_300 Hb_096027_010--Hb_000230_300 Hb_020738_010 Hb_020738_010 Hb_059275_010--Hb_020738_010 Hb_011574_020 Hb_011574_020 Hb_059275_010--Hb_011574_020 Hb_059275_010--Hb_001715_060 Hb_000586_110 Hb_000586_110 Hb_059275_010--Hb_000586_110 Hb_001638_340 Hb_001638_340 Hb_059275_010--Hb_001638_340 Hb_008895_020--Hb_001638_340 Hb_124677_090 Hb_124677_090 Hb_008895_020--Hb_124677_090 Hb_001477_060 Hb_001477_060 Hb_008895_020--Hb_001477_060 Hb_008895_020--Hb_059275_010 Hb_011853_020--Hb_011618_110 Hb_001136_040 Hb_001136_040 Hb_011853_020--Hb_001136_040 Hb_000003_370 Hb_000003_370 Hb_011853_020--Hb_000003_370 Hb_001136_160 Hb_001136_160 Hb_011853_020--Hb_001136_160 Hb_011853_020--Hb_002636_120 Hb_001715_060--Hb_001638_340 Hb_007357_010 Hb_007357_010 Hb_001715_060--Hb_007357_010 Hb_001715_060--Hb_008895_020 Hb_001715_060--Hb_124677_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0337151 0.110808 0.140761 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0683849

CAGE analysis