Hb_029991_010

Information

Type -
Description -
Location Contig29991: 11869-16239
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa001615mg
description hypothetical protein
nr
ID XP_007214638.1
description hypothetical protein PRUPE_ppa001615mg [Prunus persica]
swissprot
ID O81832
description G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4
trembl
ID M5WPY0
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001615mg PE=3 SV=1
Gene Ontology
ID GO:0016772
description g-type lectin s-receptor-like serine threonine-protein kinase rks1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029991_010 0.0 - - hypothetical protein PRUPE_ppa001615mg [Prunus persica]
2 Hb_131466_010 0.0460599131 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
3 Hb_004607_110 0.0481957808 - - PREDICTED: serine/threonine-protein kinase Nek6 [Jatropha curcas]
4 Hb_001307_050 0.0522440314 - - PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Jatropha curcas]
5 Hb_028491_010 0.0544305856 - - hypothetical protein JCGZ_12857 [Jatropha curcas]
6 Hb_000179_010 0.0546969011 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
7 Hb_000497_050 0.0648662199 - - PREDICTED: photosystem II repair protein PSB27-H1, chloroplastic [Jatropha curcas]
8 Hb_004837_010 0.0659795495 - - PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Jatropha curcas]
9 Hb_000046_400 0.0662619591 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001735_040 0.0675648259 - - PREDICTED: F-box protein SKIP2-like isoform X2 [Populus euphratica]
11 Hb_004338_050 0.0704512577 - - hypothetical protein POPTR_0004s02760g [Populus trichocarpa]
12 Hb_003913_120 0.0723318237 transcription factor TF Family: MYB hypothetical protein POPTR_0015s09430g [Populus trichocarpa]
13 Hb_033187_010 0.0728050251 - - epoxide hydrolase, putative [Ricinus communis]
14 Hb_008195_090 0.0732649476 - - conserved hypothetical protein [Ricinus communis]
15 Hb_009193_070 0.0757017885 - - fatty acid elongase 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]
16 Hb_002121_050 0.0771367192 - - hypothetical protein EUGRSUZ_D02586 [Eucalyptus grandis]
17 Hb_006132_080 0.0778295128 - - PREDICTED: cytochrome P450 86A8-like [Jatropha curcas]
18 Hb_002752_020 0.0784845369 - - FKBP-type peptidyl-prolyl cis-trans isomerase 3 family protein [Populus trichocarpa]
19 Hb_002387_010 0.0795571643 - - PREDICTED: protein STAY-GREEN LIKE, chloroplastic [Jatropha curcas]
20 Hb_003151_020 0.0798675593 - - Ankyrin repeat family protein, putative [Theobroma cacao]

Gene co-expression network

sample Hb_029991_010 Hb_029991_010 Hb_131466_010 Hb_131466_010 Hb_029991_010--Hb_131466_010 Hb_004607_110 Hb_004607_110 Hb_029991_010--Hb_004607_110 Hb_001307_050 Hb_001307_050 Hb_029991_010--Hb_001307_050 Hb_028491_010 Hb_028491_010 Hb_029991_010--Hb_028491_010 Hb_000179_010 Hb_000179_010 Hb_029991_010--Hb_000179_010 Hb_000497_050 Hb_000497_050 Hb_029991_010--Hb_000497_050 Hb_006291_050 Hb_006291_050 Hb_131466_010--Hb_006291_050 Hb_009193_070 Hb_009193_070 Hb_131466_010--Hb_009193_070 Hb_131466_010--Hb_004607_110 Hb_002042_210 Hb_002042_210 Hb_131466_010--Hb_002042_210 Hb_131466_010--Hb_028491_010 Hb_004607_110--Hb_028491_010 Hb_001141_100 Hb_001141_100 Hb_004607_110--Hb_001141_100 Hb_001735_040 Hb_001735_040 Hb_004607_110--Hb_001735_040 Hb_000803_080 Hb_000803_080 Hb_004607_110--Hb_000803_080 Hb_001307_050--Hb_000179_010 Hb_001307_050--Hb_000497_050 Hb_146255_030 Hb_146255_030 Hb_001307_050--Hb_146255_030 Hb_004837_010 Hb_004837_010 Hb_001307_050--Hb_004837_010 Hb_004338_050 Hb_004338_050 Hb_001307_050--Hb_004338_050 Hb_028491_010--Hb_001141_100 Hb_001277_130 Hb_001277_130 Hb_028491_010--Hb_001277_130 Hb_008847_050 Hb_008847_050 Hb_028491_010--Hb_008847_050 Hb_147028_010 Hb_147028_010 Hb_028491_010--Hb_147028_010 Hb_000179_010--Hb_004837_010 Hb_000251_150 Hb_000251_150 Hb_000179_010--Hb_000251_150 Hb_158001_010 Hb_158001_010 Hb_000179_010--Hb_158001_010 Hb_000046_400 Hb_000046_400 Hb_000179_010--Hb_000046_400 Hb_002752_020 Hb_002752_020 Hb_000497_050--Hb_002752_020 Hb_001277_350 Hb_001277_350 Hb_000497_050--Hb_001277_350 Hb_000497_050--Hb_004338_050 Hb_000497_050--Hb_146255_030 Hb_002121_050 Hb_002121_050 Hb_000497_050--Hb_002121_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0240632 0.602333 0.577128 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.011494 1.41349

CAGE analysis