Hb_030360_010

Information

Type -
Description -
Location Contig30360: 10880-11828
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030360_010 0.0 - - -
2 Hb_039075_010 0.0544976084 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
3 Hb_004112_080 0.0782716868 - - PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Jatropha curcas]
4 Hb_000739_190 0.0805040942 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
5 Hb_000310_040 0.0873562964 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
6 Hb_011628_010 0.0949137127 - - tonoplast intrinsic protein, putative [Ricinus communis]
7 Hb_004705_060 0.1026680903 - - PREDICTED: serine carboxypeptidase-like 45 [Jatropha curcas]
8 Hb_000813_020 0.1031760289 - - PREDICTED: metacaspase-3-like [Jatropha curcas]
9 Hb_000333_140 0.1032081358 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
10 Hb_009367_070 0.1036902567 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
11 Hb_003427_070 0.1070015442 - - hypothetical protein POPTR_0067s00310g [Populus trichocarpa]
12 Hb_003777_150 0.1085593685 - - PREDICTED: uncharacterized protein LOC105640938 isoform X1 [Jatropha curcas]
13 Hb_016911_010 0.1122275632 - - hypothetical protein POPTR_0010s15010g [Populus trichocarpa]
14 Hb_084304_010 0.1160179962 - - PREDICTED: probable auxin efflux carrier component 1c isoform X2 [Jatropha curcas]
15 Hb_004732_070 0.1174462983 - - conserved hypothetical protein [Ricinus communis]
16 Hb_034713_010 0.1177913876 - - PREDICTED: uncharacterized protein LOC105133378 [Populus euphratica]
17 Hb_051212_020 0.1204093968 - - PREDICTED: 24-methylenesterol C-methyltransferase 2-like [Jatropha curcas]
18 Hb_043552_010 0.1251648654 - - PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B isoform X1 [Jatropha curcas]
19 Hb_002304_110 0.1260246981 - - hypothetical protein MIMGU_mgv1a023246mg [Erythranthe guttata]
20 Hb_015292_020 0.1274898508 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_030360_010 Hb_030360_010 Hb_039075_010 Hb_039075_010 Hb_030360_010--Hb_039075_010 Hb_004112_080 Hb_004112_080 Hb_030360_010--Hb_004112_080 Hb_000739_190 Hb_000739_190 Hb_030360_010--Hb_000739_190 Hb_000310_040 Hb_000310_040 Hb_030360_010--Hb_000310_040 Hb_011628_010 Hb_011628_010 Hb_030360_010--Hb_011628_010 Hb_004705_060 Hb_004705_060 Hb_030360_010--Hb_004705_060 Hb_039075_010--Hb_000310_040 Hb_016911_010 Hb_016911_010 Hb_039075_010--Hb_016911_010 Hb_039075_010--Hb_004112_080 Hb_000333_140 Hb_000333_140 Hb_039075_010--Hb_000333_140 Hb_039075_010--Hb_011628_010 Hb_009367_070 Hb_009367_070 Hb_004112_080--Hb_009367_070 Hb_004112_080--Hb_004705_060 Hb_004112_080--Hb_011628_010 Hb_034713_010 Hb_034713_010 Hb_004112_080--Hb_034713_010 Hb_003427_070 Hb_003427_070 Hb_000739_190--Hb_003427_070 Hb_000684_110 Hb_000684_110 Hb_000739_190--Hb_000684_110 Hb_000739_190--Hb_039075_010 Hb_000739_190--Hb_000310_040 Hb_001110_060 Hb_001110_060 Hb_000739_190--Hb_001110_060 Hb_000310_040--Hb_000333_140 Hb_005211_170 Hb_005211_170 Hb_000310_040--Hb_005211_170 Hb_004732_070 Hb_004732_070 Hb_000310_040--Hb_004732_070 Hb_000861_060 Hb_000861_060 Hb_000310_040--Hb_000861_060 Hb_011628_010--Hb_000333_140 Hb_001136_080 Hb_001136_080 Hb_011628_010--Hb_001136_080 Hb_002307_150 Hb_002307_150 Hb_011628_010--Hb_002307_150 Hb_011628_010--Hb_005211_170 Hb_011628_010--Hb_009367_070 Hb_004705_060--Hb_009367_070 Hb_085829_010 Hb_085829_010 Hb_004705_060--Hb_085829_010 Hb_004705_060--Hb_000333_140 Hb_000207_060 Hb_000207_060 Hb_004705_060--Hb_000207_060 Hb_004705_060--Hb_034713_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.150559 0.49537 1.45282 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0615072 0.102139

CAGE analysis