Hb_030526_020

Information

Type -
Description -
Location Contig30526: 13183-19331
Sequence    

Annotation

kegg
ID pop:POPTR_0006s19480g
description POPTRDRAFT_416119; hypothetical protein
nr
ID XP_012078526.1
description PREDICTED: mitogen-activated protein kinase kinase kinase 2-like [Jatropha curcas]
swissprot
ID O22042
description Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1
trembl
ID A0A067KK10
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13145 PE=3 SV=1
Gene Ontology
ID GO:0004672
description mitogen-activated protein kinase kinase kinase yoda-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030526_020 0.0 - - PREDICTED: mitogen-activated protein kinase kinase kinase 2-like [Jatropha curcas]
2 Hb_001969_100 0.1985017678 - - signal transducer, putative [Ricinus communis]
3 Hb_003026_040 0.2069121487 - - Uncharacterized protein TCM_007861 [Theobroma cacao]
4 Hb_000525_070 0.2226893721 - - PREDICTED: WAT1-related protein At5g40240-like [Jatropha curcas]
5 Hb_001089_010 0.2269082205 - - PREDICTED: GDSL esterase/lipase 5-like [Jatropha curcas]
6 Hb_000815_110 0.2272919782 - - RecName: Full=Casparian strip membrane protein 4; Short=RcCASP4 [Ricinus communis]
7 Hb_116102_010 0.2283827488 - - hypothetical protein POPTR_0204s00240g [Populus trichocarpa]
8 Hb_000261_470 0.2288276397 transcription factor TF Family: bHLH PREDICTED: transcription factor FAMA isoform X2 [Populus euphratica]
9 Hb_000007_270 0.2355944282 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004871_030 0.2376366323 - - conserved hypothetical protein [Ricinus communis]
11 Hb_140249_020 0.2392776647 transcription factor TF Family: MIKC PREDICTED: MADS-box protein CMB1-like [Jatropha curcas]
12 Hb_010407_090 0.2399600199 - - PREDICTED: aldo-keto reductase isoform X1 [Jatropha curcas]
13 Hb_011537_140 0.2409969204 - - hypothetical protein POPTR_0001s05320g [Populus trichocarpa]
14 Hb_003106_160 0.2443397759 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 [Jatropha curcas]
15 Hb_001433_080 0.2445082734 - - Pectinesterase precursor, putative [Ricinus communis]
16 Hb_000165_170 0.2448206288 transcription factor TF Family: G2-like hypothetical protein POPTR_0010s19310g [Populus trichocarpa]
17 Hb_000002_140 0.2450030523 - - hypothetical protein JCGZ_02318 [Jatropha curcas]
18 Hb_000763_040 0.2460089133 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
19 Hb_007242_030 0.2475678699 - - PREDICTED: methylesterase 3-like isoform X2 [Tarenaya hassleriana]
20 Hb_002006_050 0.2496447824 - - actin binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_030526_020 Hb_030526_020 Hb_001969_100 Hb_001969_100 Hb_030526_020--Hb_001969_100 Hb_003026_040 Hb_003026_040 Hb_030526_020--Hb_003026_040 Hb_000525_070 Hb_000525_070 Hb_030526_020--Hb_000525_070 Hb_001089_010 Hb_001089_010 Hb_030526_020--Hb_001089_010 Hb_000815_110 Hb_000815_110 Hb_030526_020--Hb_000815_110 Hb_116102_010 Hb_116102_010 Hb_030526_020--Hb_116102_010 Hb_001969_100--Hb_003026_040 Hb_000261_470 Hb_000261_470 Hb_001969_100--Hb_000261_470 Hb_001969_100--Hb_000525_070 Hb_001133_100 Hb_001133_100 Hb_001969_100--Hb_001133_100 Hb_010407_090 Hb_010407_090 Hb_001969_100--Hb_010407_090 Hb_006916_080 Hb_006916_080 Hb_001969_100--Hb_006916_080 Hb_000763_040 Hb_000763_040 Hb_003026_040--Hb_000763_040 Hb_003026_040--Hb_000525_070 Hb_000915_250 Hb_000915_250 Hb_003026_040--Hb_000915_250 Hb_003026_040--Hb_000261_470 Hb_011537_140 Hb_011537_140 Hb_003026_040--Hb_011537_140 Hb_011282_040 Hb_011282_040 Hb_000525_070--Hb_011282_040 Hb_000525_070--Hb_000763_040 Hb_000525_070--Hb_000915_250 Hb_001268_170 Hb_001268_170 Hb_000525_070--Hb_001268_170 Hb_000002_140 Hb_000002_140 Hb_001089_010--Hb_000002_140 Hb_140249_020 Hb_140249_020 Hb_001089_010--Hb_140249_020 Hb_002162_020 Hb_002162_020 Hb_001089_010--Hb_002162_020 Hb_001089_010--Hb_000815_110 Hb_001433_080 Hb_001433_080 Hb_001089_010--Hb_001433_080 Hb_000165_170 Hb_000165_170 Hb_001089_010--Hb_000165_170 Hb_000815_110--Hb_140249_020 Hb_000815_110--Hb_001433_080 Hb_000007_270 Hb_000007_270 Hb_000815_110--Hb_000007_270 Hb_000047_100 Hb_000047_100 Hb_000815_110--Hb_000047_100 Hb_002041_020 Hb_002041_020 Hb_000815_110--Hb_002041_020 Hb_004871_030 Hb_004871_030 Hb_116102_010--Hb_004871_030 Hb_003861_150 Hb_003861_150 Hb_116102_010--Hb_003861_150 Hb_116102_010--Hb_010407_090 Hb_166230_010 Hb_166230_010 Hb_116102_010--Hb_166230_010 Hb_000174_080 Hb_000174_080 Hb_116102_010--Hb_000174_080 Hb_005977_040 Hb_005977_040 Hb_116102_010--Hb_005977_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.149321 0.00651676 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0153269 0.0291617 0.0182717 0.260076

CAGE analysis