Hb_030765_020

Information

Type -
Description -
Location Contig30765: 13626-18925
Sequence    

Annotation

kegg
ID pop:POPTR_0017s07820g
description hypothetical protein
nr
ID AIU41648.1
description ABC transporter family protein [Hevea brasiliensis]
swissprot
ID Q8RXN0
description ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1
trembl
ID A0A097P9S4
description ABC transporter family protein OS=Hevea brasiliensis GN=ABCG11 PE=2 SV=1
Gene Ontology
ID GO:0016020
description abc transporter g family member 11-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030765_020 0.0 - - ABC transporter family protein [Hevea brasiliensis]
2 Hb_000143_050 0.0797476645 - - PREDICTED: MFP1 attachment factor 1-like [Jatropha curcas]
3 Hb_012799_060 0.0939138652 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
4 Hb_000078_030 0.0949797114 - - conserved hypothetical protein [Ricinus communis]
5 Hb_060668_010 0.096285056 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
6 Hb_001741_080 0.1062944284 rubber biosynthesis Gene Name: REF8 small rubber particle protein [Hevea brasiliensis]
7 Hb_000580_170 0.1066799022 - - PREDICTED: arginase 1, mitochondrial [Jatropha curcas]
8 Hb_000107_650 0.1070064374 - - PREDICTED: cyclic phosphodiesterase-like [Jatropha curcas]
9 Hb_005016_130 0.1078338383 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
10 Hb_000284_010 0.1107760817 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_04974 [Jatropha curcas]
11 Hb_029584_140 0.1112361911 - - senescence-associated family protein [Populus trichocarpa]
12 Hb_001102_010 0.1156214512 - - PREDICTED: solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like isoform X2 [Glycine max]
13 Hb_025087_010 0.1166601382 - - PREDICTED: RING-H2 finger protein ATL56 [Jatropha curcas]
14 Hb_000193_230 0.1178037272 - - PREDICTED: NEP1-interacting protein-like 2 isoform X1 [Jatropha curcas]
15 Hb_001722_040 0.1185928157 - - PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A-like [Jatropha curcas]
16 Hb_008695_190 0.1201858045 transcription factor TF Family: ARF PREDICTED: auxin response factor 17 [Jatropha curcas]
17 Hb_003751_120 0.12185313 - - -
18 Hb_002298_040 0.1224329014 - - PREDICTED: uncharacterized protein LOC105633642 [Jatropha curcas]
19 Hb_000062_580 0.1234176561 - - ATP binding protein, putative [Ricinus communis]
20 Hb_001999_120 0.1248629668 - - PREDICTED: pleckstrin homology domain-containing protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_030765_020 Hb_030765_020 Hb_000143_050 Hb_000143_050 Hb_030765_020--Hb_000143_050 Hb_012799_060 Hb_012799_060 Hb_030765_020--Hb_012799_060 Hb_000078_030 Hb_000078_030 Hb_030765_020--Hb_000078_030 Hb_060668_010 Hb_060668_010 Hb_030765_020--Hb_060668_010 Hb_001741_080 Hb_001741_080 Hb_030765_020--Hb_001741_080 Hb_000580_170 Hb_000580_170 Hb_030765_020--Hb_000580_170 Hb_005276_100 Hb_005276_100 Hb_000143_050--Hb_005276_100 Hb_000032_260 Hb_000032_260 Hb_000143_050--Hb_000032_260 Hb_005615_070 Hb_005615_070 Hb_000143_050--Hb_005615_070 Hb_001722_040 Hb_001722_040 Hb_000143_050--Hb_001722_040 Hb_183963_020 Hb_183963_020 Hb_000143_050--Hb_183963_020 Hb_012799_060--Hb_000580_170 Hb_012799_060--Hb_000078_030 Hb_012799_060--Hb_001741_080 Hb_005016_130 Hb_005016_130 Hb_012799_060--Hb_005016_130 Hb_003540_230 Hb_003540_230 Hb_012799_060--Hb_003540_230 Hb_000193_230 Hb_000193_230 Hb_000078_030--Hb_000193_230 Hb_000284_010 Hb_000284_010 Hb_000078_030--Hb_000284_010 Hb_000078_030--Hb_005016_130 Hb_115919_020 Hb_115919_020 Hb_000078_030--Hb_115919_020 Hb_001102_010 Hb_001102_010 Hb_000078_030--Hb_001102_010 Hb_002298_040 Hb_002298_040 Hb_000078_030--Hb_002298_040 Hb_060668_010--Hb_001741_080 Hb_004206_030 Hb_004206_030 Hb_060668_010--Hb_004206_030 Hb_000041_070 Hb_000041_070 Hb_060668_010--Hb_000041_070 Hb_060668_010--Hb_005016_130 Hb_001514_180 Hb_001514_180 Hb_060668_010--Hb_001514_180 Hb_001741_080--Hb_005016_130 Hb_001741_080--Hb_000041_070 Hb_001741_080--Hb_000078_030 Hb_000444_030 Hb_000444_030 Hb_001741_080--Hb_000444_030 Hb_000580_170--Hb_000078_030 Hb_000580_170--Hb_001741_080 Hb_000580_170--Hb_003540_230 Hb_000580_170--Hb_005016_130 Hb_000580_170--Hb_001102_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.784 1.32348 0.0267457 0.248586 5.35235 5.85217
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.6007 11.5829 9.01376 1.07916 0.0665436

CAGE analysis