Hb_030827_070

Information

Type -
Description -
Location Contig30827: 38471-39883
Sequence    

Annotation

kegg
ID pop:POPTR_0015s13400g
description POPTRDRAFT_575794; hypothetical protein
nr
ID XP_012090285.1
description PREDICTED: transmembrane protein 161B [Jatropha curcas]
swissprot
ID Q8C2L6
description Transmembrane protein 161B OS=Mus musculus GN=Tmem161b PE=2 SV=1
trembl
ID A0A067JQN5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26136 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030827_070 0.0 - - PREDICTED: transmembrane protein 161B [Jatropha curcas]
2 Hb_000482_020 0.0908539461 - - cell wall invertase [Manihot esculenta]
3 Hb_050454_010 0.1049537007 - - PREDICTED: uncharacterized protein LOC105630497 [Jatropha curcas]
4 Hb_022833_100 0.1128307894 - - PREDICTED: phosphatidate cytidylyltransferase 1 [Jatropha curcas]
5 Hb_000429_050 0.1145740893 - - PREDICTED: serine/threonine-protein kinase Nek6 isoform X2 [Jatropha curcas]
6 Hb_044736_010 0.1155550871 - - ubiquitin-protein ligase, putative [Ricinus communis]
7 Hb_001018_110 0.124539407 - - unnamed protein product [Coffea canephora]
8 Hb_018292_010 0.1260561142 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-3 [Jatropha curcas]
9 Hb_002150_040 0.1297555792 - - PREDICTED: CMP-sialic acid transporter 1 isoform X3 [Jatropha curcas]
10 Hb_001492_020 0.1339125338 - - PREDICTED: diacylglycerol kinase 3-like [Jatropha curcas]
11 Hb_000359_090 0.1341309297 - - PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial-like [Malus domestica]
12 Hb_000249_070 0.1345378586 - - PREDICTED: probable calcium-binding protein CML35 [Jatropha curcas]
13 Hb_001018_130 0.1354251246 - - PREDICTED: uncharacterized protein LOC105638260 [Jatropha curcas]
14 Hb_011671_250 0.1368206389 - - ubiquitin-protein ligase, putative [Ricinus communis]
15 Hb_002828_020 0.1369601087 - - protein binding protein, putative [Ricinus communis]
16 Hb_000483_220 0.1380110839 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL2-like [Jatropha curcas]
17 Hb_005023_010 0.1383223205 - - PREDICTED: putative lipase ROG1 [Jatropha curcas]
18 Hb_002735_050 0.1396926601 - - PREDICTED: thiamine-repressible mitochondrial transport protein THI74 isoform X1 [Jatropha curcas]
19 Hb_032969_020 0.1401301235 - - conserved hypothetical protein [Ricinus communis]
20 Hb_004837_130 0.1404202921 - - PREDICTED: armadillo repeat-containing protein 8 [Jatropha curcas]

Gene co-expression network

sample Hb_030827_070 Hb_030827_070 Hb_000482_020 Hb_000482_020 Hb_030827_070--Hb_000482_020 Hb_050454_010 Hb_050454_010 Hb_030827_070--Hb_050454_010 Hb_022833_100 Hb_022833_100 Hb_030827_070--Hb_022833_100 Hb_000429_050 Hb_000429_050 Hb_030827_070--Hb_000429_050 Hb_044736_010 Hb_044736_010 Hb_030827_070--Hb_044736_010 Hb_001018_110 Hb_001018_110 Hb_030827_070--Hb_001018_110 Hb_000482_020--Hb_050454_010 Hb_009646_040 Hb_009646_040 Hb_000482_020--Hb_009646_040 Hb_003571_030 Hb_003571_030 Hb_000482_020--Hb_003571_030 Hb_000482_020--Hb_044736_010 Hb_000483_220 Hb_000483_220 Hb_000482_020--Hb_000483_220 Hb_050454_010--Hb_044736_010 Hb_050454_010--Hb_000483_220 Hb_001766_080 Hb_001766_080 Hb_050454_010--Hb_001766_080 Hb_001377_270 Hb_001377_270 Hb_050454_010--Hb_001377_270 Hb_050454_010--Hb_001018_110 Hb_005269_040 Hb_005269_040 Hb_050454_010--Hb_005269_040 Hb_000172_290 Hb_000172_290 Hb_022833_100--Hb_000172_290 Hb_018292_010 Hb_018292_010 Hb_022833_100--Hb_018292_010 Hb_022833_100--Hb_044736_010 Hb_002289_080 Hb_002289_080 Hb_022833_100--Hb_002289_080 Hb_002445_120 Hb_002445_120 Hb_022833_100--Hb_002445_120 Hb_003777_310 Hb_003777_310 Hb_022833_100--Hb_003777_310 Hb_000359_090 Hb_000359_090 Hb_000429_050--Hb_000359_090 Hb_012651_010 Hb_012651_010 Hb_000429_050--Hb_012651_010 Hb_000028_600 Hb_000028_600 Hb_000429_050--Hb_000028_600 Hb_002781_030 Hb_002781_030 Hb_000429_050--Hb_002781_030 Hb_001014_210 Hb_001014_210 Hb_000429_050--Hb_001014_210 Hb_000258_240 Hb_000258_240 Hb_000429_050--Hb_000258_240 Hb_044736_010--Hb_002445_120 Hb_044736_010--Hb_001018_110 Hb_001018_130 Hb_001018_130 Hb_044736_010--Hb_001018_130 Hb_012322_010 Hb_012322_010 Hb_044736_010--Hb_012322_010 Hb_000300_630 Hb_000300_630 Hb_001018_110--Hb_000300_630 Hb_005023_010 Hb_005023_010 Hb_001018_110--Hb_005023_010 Hb_001018_110--Hb_001018_130 Hb_003994_280 Hb_003994_280 Hb_001018_110--Hb_003994_280 Hb_072922_010 Hb_072922_010 Hb_001018_110--Hb_072922_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.51253 4.09591 1.35789 13.9153 4.01099 7.72174
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.0686 3.84356 7.00673 5.29013 5.16361

CAGE analysis