Hb_030827_080

Information

Type -
Description -
Location Contig30827: 43376-44551
Sequence    

Annotation

kegg
ID rcu:RCOM_1496620
description hypothetical protein
nr
ID XP_012090284.1
description PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JRZ4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26135 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32553: 43227-43605
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030827_080 0.0 - - PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
2 Hb_002739_160 0.0313138133 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
3 Hb_010642_010 0.0637584216 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
4 Hb_008352_020 0.0654524522 - - hypothetical protein [Cecembia lonarensis]
5 Hb_153180_010 0.0682980767 - - NBS-LRR disease resistance protein NBS49 [Dimocarpus longan]
6 Hb_001198_180 0.0744950506 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
7 Hb_001663_090 0.1007007195 - - ribonuclease t2, putative [Ricinus communis]
8 Hb_001562_030 0.1011761223 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
9 Hb_004324_100 0.1022439897 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
10 Hb_011355_020 0.1080529263 - - extensin, proline-rich protein, putative [Ricinus communis]
11 Hb_000028_330 0.1094415402 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
12 Hb_008725_020 0.1097249909 - - PREDICTED: cytidine deaminase 1 [Jatropha curcas]
13 Hb_001856_130 0.1106110787 - - hypothetical protein CISIN_1g022795mg [Citrus sinensis]
14 Hb_000714_070 0.110704764 transcription factor TF Family: LOB hypothetical protein JCGZ_14754 [Jatropha curcas]
15 Hb_170632_010 0.1184730629 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
16 Hb_029622_090 0.1200978197 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
17 Hb_003435_040 0.1220098418 - - tonoplast intrinsic protein [Hevea brasiliensis]
18 Hb_000060_080 0.1220698629 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 2 protein, putative [Ricinus communis]
19 Hb_145268_010 0.1228022767 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Jatropha curcas]
20 Hb_002325_050 0.1230423022 transcription factor TF Family: MYB MYB transcriptional factor [Populus nigra]

Gene co-expression network

sample Hb_030827_080 Hb_030827_080 Hb_002739_160 Hb_002739_160 Hb_030827_080--Hb_002739_160 Hb_010642_010 Hb_010642_010 Hb_030827_080--Hb_010642_010 Hb_008352_020 Hb_008352_020 Hb_030827_080--Hb_008352_020 Hb_153180_010 Hb_153180_010 Hb_030827_080--Hb_153180_010 Hb_001198_180 Hb_001198_180 Hb_030827_080--Hb_001198_180 Hb_001663_090 Hb_001663_090 Hb_030827_080--Hb_001663_090 Hb_002739_160--Hb_153180_010 Hb_002739_160--Hb_010642_010 Hb_002739_160--Hb_008352_020 Hb_002739_160--Hb_001198_180 Hb_002739_160--Hb_001663_090 Hb_010642_010--Hb_008352_020 Hb_038718_010 Hb_038718_010 Hb_010642_010--Hb_038718_010 Hb_003939_090 Hb_003939_090 Hb_010642_010--Hb_003939_090 Hb_010642_010--Hb_001198_180 Hb_145268_010 Hb_145268_010 Hb_008352_020--Hb_145268_010 Hb_000028_330 Hb_000028_330 Hb_008352_020--Hb_000028_330 Hb_008352_020--Hb_001663_090 Hb_001856_130 Hb_001856_130 Hb_153180_010--Hb_001856_130 Hb_153180_010--Hb_001198_180 Hb_002522_040 Hb_002522_040 Hb_153180_010--Hb_002522_040 Hb_008725_020 Hb_008725_020 Hb_153180_010--Hb_008725_020 Hb_001562_030 Hb_001562_030 Hb_001198_180--Hb_001562_030 Hb_002897_030 Hb_002897_030 Hb_001198_180--Hb_002897_030 Hb_011355_020 Hb_011355_020 Hb_001198_180--Hb_011355_020 Hb_001198_180--Hb_008725_020 Hb_029622_090 Hb_029622_090 Hb_001663_090--Hb_029622_090 Hb_002676_110 Hb_002676_110 Hb_001663_090--Hb_002676_110 Hb_001663_090--Hb_000028_330 Hb_000060_080 Hb_000060_080 Hb_001663_090--Hb_000060_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.34083 0.928808 2.41549 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.298942 0.252161

CAGE analysis