Hb_030903_020

Information

Type -
Description -
Location Contig30903: 2408-18115
Sequence    

Annotation

kegg
ID tcc:TCM_036537
description 12-oxophytodienoate reductase 2
nr
ID XP_012077426.1
description PREDICTED: putative 12-oxophytodienoate reductase 11 [Jatropha curcas]
swissprot
ID B9FSC8
description Putative 12-oxophytodienoate reductase 11 OS=Oryza sativa subsp. japonica GN=OPR11 PE=2 SV=1
trembl
ID A0A061FJX4
description 12-oxophytodienoate reductase 2 OS=Theobroma cacao GN=TCM_036537 PE=4 SV=1
Gene Ontology
ID GO:0010181
description 12-oxophytodienoate reductase 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030903_020 0.0 - - PREDICTED: putative 12-oxophytodienoate reductase 11 [Jatropha curcas]
2 Hb_032071_010 0.1287952457 - - hypothetical protein EUGRSUZ_J02969 [Eucalyptus grandis]
3 Hb_010994_020 0.1330982951 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
4 Hb_012022_020 0.141588605 transcription factor TF Family: G2-like hypothetical protein POPTR_0006s10190g [Populus trichocarpa]
5 Hb_001846_030 0.1456065937 - - PREDICTED: cytochrome P450 94A2-like [Jatropha curcas]
6 Hb_008651_010 0.1559067326 - - cytochrome P450, putative [Ricinus communis]
7 Hb_000997_130 0.1577269538 - - DNA binding protein, putative [Ricinus communis]
8 Hb_004899_010 0.1580520617 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
9 Hb_004612_020 0.1586664965 - - PREDICTED: tetraspanin-8-like [Populus euphratica]
10 Hb_002289_180 0.160845001 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Nelumbo nucifera]
11 Hb_112703_010 0.1623161915 - - PREDICTED: cytochrome P450 CYP72A219-like [Prunus mume]
12 Hb_179363_010 0.1656367484 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
13 Hb_000192_030 0.1657213685 - - PREDICTED: TATA-box-binding protein 2 isoform X1 [Setaria italica]
14 Hb_000164_160 0.1659908129 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
15 Hb_010223_010 0.1678315262 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
16 Hb_008948_070 0.1753011136 - - PREDICTED: phospholipase D alpha 1-like isoform X1 [Jatropha curcas]
17 Hb_000819_020 0.1754636041 - - hypothetical protein PRUPE_ppa020290mg, partial [Prunus persica]
18 Hb_167186_010 0.1763343577 - - cation-transporting atpase plant, putative [Ricinus communis]
19 Hb_107174_010 0.1790134868 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_067028_010 0.1794469841 - - BnaC03g72040D [Brassica napus]

Gene co-expression network

sample Hb_030903_020 Hb_030903_020 Hb_032071_010 Hb_032071_010 Hb_030903_020--Hb_032071_010 Hb_010994_020 Hb_010994_020 Hb_030903_020--Hb_010994_020 Hb_012022_020 Hb_012022_020 Hb_030903_020--Hb_012022_020 Hb_001846_030 Hb_001846_030 Hb_030903_020--Hb_001846_030 Hb_008651_010 Hb_008651_010 Hb_030903_020--Hb_008651_010 Hb_000997_130 Hb_000997_130 Hb_030903_020--Hb_000997_130 Hb_002289_180 Hb_002289_180 Hb_032071_010--Hb_002289_180 Hb_112703_010 Hb_112703_010 Hb_032071_010--Hb_112703_010 Hb_032071_010--Hb_008651_010 Hb_179363_010 Hb_179363_010 Hb_032071_010--Hb_179363_010 Hb_032071_010--Hb_001846_030 Hb_032071_010--Hb_000997_130 Hb_010994_020--Hb_008651_010 Hb_010223_010 Hb_010223_010 Hb_010994_020--Hb_010223_010 Hb_107174_010 Hb_107174_010 Hb_010994_020--Hb_107174_010 Hb_010994_020--Hb_000997_130 Hb_010994_020--Hb_179363_010 Hb_017693_040 Hb_017693_040 Hb_012022_020--Hb_017693_040 Hb_012022_020--Hb_001846_030 Hb_000069_530 Hb_000069_530 Hb_012022_020--Hb_000069_530 Hb_012022_020--Hb_032071_010 Hb_120011_010 Hb_120011_010 Hb_012022_020--Hb_120011_010 Hb_077694_010 Hb_077694_010 Hb_012022_020--Hb_077694_010 Hb_008948_070 Hb_008948_070 Hb_001846_030--Hb_008948_070 Hb_006478_140 Hb_006478_140 Hb_001846_030--Hb_006478_140 Hb_001846_030--Hb_017693_040 Hb_000192_030 Hb_000192_030 Hb_001846_030--Hb_000192_030 Hb_008651_010--Hb_179363_010 Hb_008651_010--Hb_112703_010 Hb_008651_010--Hb_002289_180 Hb_008651_010--Hb_010223_010 Hb_000433_050 Hb_000433_050 Hb_008651_010--Hb_000433_050 Hb_000997_130--Hb_002289_180 Hb_046610_010 Hb_046610_010 Hb_000997_130--Hb_046610_010 Hb_164577_010 Hb_164577_010 Hb_000997_130--Hb_164577_010 Hb_007546_010 Hb_007546_010 Hb_000997_130--Hb_007546_010 Hb_000164_160 Hb_000164_160 Hb_000997_130--Hb_000164_160 Hb_000997_130--Hb_010223_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0088694 0.712931 0.808922 0.178863 0.0166046 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0301359 0.0252006 0

CAGE analysis