Hb_031527_110

Information

Type -
Description -
Location Contig31527: 82256-83075
Sequence    

Annotation

kegg
ID rcu:RCOM_1604340
description glutathione s-transferase, putative (EC:4.4.1.5)
nr
ID XP_012074717.1
description PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]
swissprot
ID Q03666
description Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1
trembl
ID A0A067KL86
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10495 PE=3 SV=1
Gene Ontology
ID GO:0004462
description probable glutathione s-transferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33269: 82801-83161
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031527_110 0.0 - - PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]
2 Hb_002174_040 0.1104057538 - - DNAJ heat shock family protein [Theobroma cacao]
3 Hb_001904_050 0.113485916 - - alpha-tubulin 1 [Hevea brasiliensis]
4 Hb_000962_070 0.127343914 - - PREDICTED: probable plastid-lipid-associated protein 13, chloroplastic isoform X2 [Jatropha curcas]
5 Hb_000181_350 0.1299417211 - - PREDICTED: uncharacterized protein LOC105111090 [Populus euphratica]
6 Hb_042083_040 0.1345382533 - - conserved hypothetical protein [Ricinus communis]
7 Hb_007441_080 0.1391989204 - - PREDICTED: ELMO domain-containing protein C-like [Jatropha curcas]
8 Hb_001663_040 0.1395219238 - - hypothetical protein B456_007G162000 [Gossypium raimondii]
9 Hb_000107_510 0.1406991016 - - phosphate transporter [Manihot esculenta]
10 Hb_000742_020 0.1423558012 - - ARF GTPase activator, putative [Ricinus communis]
11 Hb_001976_030 0.1467626197 - - PREDICTED: protein NETWORKED 2D-like isoform X2 [Jatropha curcas]
12 Hb_007101_110 0.1483617336 - - PREDICTED: nucleobase-ascorbate transporter 7 [Jatropha curcas]
13 Hb_000465_320 0.148656383 - - PREDICTED: nudix hydrolase 8 [Jatropha curcas]
14 Hb_000152_440 0.1494474054 - - PREDICTED: UDP-glucuronate 4-epimerase 3-like [Jatropha curcas]
15 Hb_121881_010 0.1508180821 - - hypothetical protein POPTR_0015s15770g [Populus trichocarpa]
16 Hb_005563_010 0.1509195482 - - PREDICTED: kinesin-II 85 kDa subunit isoform X1 [Jatropha curcas]
17 Hb_003453_050 0.1529338999 - - PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-3-like [Jatropha curcas]
18 Hb_003875_030 0.1554643445 - - PREDICTED: probable plastidic glucose transporter 1 [Jatropha curcas]
19 Hb_000096_190 0.155519156 - - unknown [Lotus japonicus]
20 Hb_000167_050 0.1559737366 - - PREDICTED: uncharacterized protein LOC105641106 [Jatropha curcas]

Gene co-expression network

sample Hb_031527_110 Hb_031527_110 Hb_002174_040 Hb_002174_040 Hb_031527_110--Hb_002174_040 Hb_001904_050 Hb_001904_050 Hb_031527_110--Hb_001904_050 Hb_000962_070 Hb_000962_070 Hb_031527_110--Hb_000962_070 Hb_000181_350 Hb_000181_350 Hb_031527_110--Hb_000181_350 Hb_042083_040 Hb_042083_040 Hb_031527_110--Hb_042083_040 Hb_007441_080 Hb_007441_080 Hb_031527_110--Hb_007441_080 Hb_012573_050 Hb_012573_050 Hb_002174_040--Hb_012573_050 Hb_002174_040--Hb_000181_350 Hb_001663_040 Hb_001663_040 Hb_002174_040--Hb_001663_040 Hb_011224_100 Hb_011224_100 Hb_002174_040--Hb_011224_100 Hb_002184_090 Hb_002184_090 Hb_002174_040--Hb_002184_090 Hb_006711_090 Hb_006711_090 Hb_001904_050--Hb_006711_090 Hb_000742_020 Hb_000742_020 Hb_001904_050--Hb_000742_020 Hb_154038_020 Hb_154038_020 Hb_001904_050--Hb_154038_020 Hb_001904_050--Hb_007441_080 Hb_001904_050--Hb_000181_350 Hb_000096_190 Hb_000096_190 Hb_000962_070--Hb_000096_190 Hb_000962_070--Hb_042083_040 Hb_000796_150 Hb_000796_150 Hb_000962_070--Hb_000796_150 Hb_000638_070 Hb_000638_070 Hb_000962_070--Hb_000638_070 Hb_000962_070--Hb_000181_350 Hb_000057_110 Hb_000057_110 Hb_000962_070--Hb_000057_110 Hb_000181_350--Hb_001663_040 Hb_007101_110 Hb_007101_110 Hb_000181_350--Hb_007101_110 Hb_000181_350--Hb_000057_110 Hb_000200_300 Hb_000200_300 Hb_000181_350--Hb_000200_300 Hb_000684_030 Hb_000684_030 Hb_000181_350--Hb_000684_030 Hb_000062_330 Hb_000062_330 Hb_000181_350--Hb_000062_330 Hb_174865_040 Hb_174865_040 Hb_042083_040--Hb_174865_040 Hb_001976_030 Hb_001976_030 Hb_042083_040--Hb_001976_030 Hb_001628_120 Hb_001628_120 Hb_042083_040--Hb_001628_120 Hb_156850_100 Hb_156850_100 Hb_042083_040--Hb_156850_100 Hb_000049_180 Hb_000049_180 Hb_042083_040--Hb_000049_180 Hb_042083_040--Hb_000096_190 Hb_002110_100 Hb_002110_100 Hb_007441_080--Hb_002110_100 Hb_007441_080--Hb_000742_020 Hb_007441_080--Hb_000684_030 Hb_003602_060 Hb_003602_060 Hb_007441_080--Hb_003602_060 Hb_000590_120 Hb_000590_120 Hb_007441_080--Hb_000590_120 Hb_003875_030 Hb_003875_030 Hb_007441_080--Hb_003875_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.535088 0.392949 3.15119 4.26094 0.331972 1.02515
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.12801 1.43236 2.05682 0.389417 3.21688

CAGE analysis