Hb_031579_010

Information

Type -
Description -
Location Contig31579: 3-2425
Sequence    

Annotation

kegg
ID mtr:MTR_3g043850
description hypothetical protein
nr
ID BAJ53217.1
description JHL22C18.10 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUA7
description JHL22C18.10 protein OS=Jatropha curcas GN=JHL22C18.10 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031579_010 0.0 - - JHL22C18.10 [Jatropha curcas]
2 Hb_000034_060 0.0991996405 - - PREDICTED: O-acyltransferase WSD1-like [Citrus sinensis]
3 Hb_000633_030 0.1033206307 - - hypothetical protein POPTR_0003s21020g, partial [Populus trichocarpa]
4 Hb_010193_020 0.105006526 - - PREDICTED: NADH--cytochrome b5 reductase 1-like [Jatropha curcas]
5 Hb_000866_400 0.1087609529 - - -
6 Hb_011709_010 0.1186792673 - - PREDICTED: phytosulfokine receptor 1-like [Jatropha curcas]
7 Hb_000620_050 0.12019683 - - PREDICTED: uncharacterized protein LOC105649924 [Jatropha curcas]
8 Hb_000917_030 0.1273737068 - - PREDICTED: uncharacterized protein LOC102629571 [Citrus sinensis]
9 Hb_002370_020 0.1277946934 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
10 Hb_001584_270 0.1308893469 - - conserved hypothetical protein [Ricinus communis]
11 Hb_184074_010 0.1349651372 - - PREDICTED: uncharacterized protein LOC105639054 [Jatropha curcas]
12 Hb_006386_010 0.135556926 - - PREDICTED: polygalacturonase QRT3 [Jatropha curcas]
13 Hb_003371_280 0.1358391748 - - unnamed protein product [Vitis vinifera]
14 Hb_001534_140 0.1363523542 transcription factor TF Family: PLATZ PREDICTED: uncharacterized protein LOC105642310 [Jatropha curcas]
15 Hb_001268_290 0.1383557645 - - PREDICTED: glutaredoxin-C1-like [Jatropha curcas]
16 Hb_000414_090 0.1401522316 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003055_100 0.1457652155 - - PREDICTED: uncharacterized protein At5g65660 [Jatropha curcas]
18 Hb_000368_050 0.1468356715 - - beta-galactosidase, putative [Ricinus communis]
19 Hb_000462_120 0.1468927744 transcription factor TF Family: PLATZ PREDICTED: uncharacterized protein LOC105642310 [Jatropha curcas]
20 Hb_003968_030 0.149167067 - - UDP-glucosyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_031579_010 Hb_031579_010 Hb_000034_060 Hb_000034_060 Hb_031579_010--Hb_000034_060 Hb_000633_030 Hb_000633_030 Hb_031579_010--Hb_000633_030 Hb_010193_020 Hb_010193_020 Hb_031579_010--Hb_010193_020 Hb_000866_400 Hb_000866_400 Hb_031579_010--Hb_000866_400 Hb_011709_010 Hb_011709_010 Hb_031579_010--Hb_011709_010 Hb_000620_050 Hb_000620_050 Hb_031579_010--Hb_000620_050 Hb_146036_010 Hb_146036_010 Hb_000034_060--Hb_146036_010 Hb_000685_100 Hb_000685_100 Hb_000034_060--Hb_000685_100 Hb_002370_020 Hb_002370_020 Hb_000034_060--Hb_002370_020 Hb_000917_030 Hb_000917_030 Hb_000034_060--Hb_000917_030 Hb_000910_030 Hb_000910_030 Hb_000034_060--Hb_000910_030 Hb_000413_030 Hb_000413_030 Hb_000633_030--Hb_000413_030 Hb_001269_160 Hb_001269_160 Hb_000633_030--Hb_001269_160 Hb_005056_040 Hb_005056_040 Hb_000633_030--Hb_005056_040 Hb_001456_030 Hb_001456_030 Hb_000633_030--Hb_001456_030 Hb_064047_020 Hb_064047_020 Hb_000633_030--Hb_064047_020 Hb_011344_040 Hb_011344_040 Hb_010193_020--Hb_011344_040 Hb_010193_020--Hb_011709_010 Hb_185608_010 Hb_185608_010 Hb_010193_020--Hb_185608_010 Hb_057862_010 Hb_057862_010 Hb_010193_020--Hb_057862_010 Hb_049955_010 Hb_049955_010 Hb_010193_020--Hb_049955_010 Hb_005269_060 Hb_005269_060 Hb_010193_020--Hb_005269_060 Hb_025623_010 Hb_025623_010 Hb_000866_400--Hb_025623_010 Hb_000866_400--Hb_002370_020 Hb_011501_020 Hb_011501_020 Hb_000866_400--Hb_011501_020 Hb_000866_400--Hb_000620_050 Hb_149507_010 Hb_149507_010 Hb_000866_400--Hb_149507_010 Hb_011709_010--Hb_049955_010 Hb_138585_010 Hb_138585_010 Hb_011709_010--Hb_138585_010 Hb_009252_070 Hb_009252_070 Hb_011709_010--Hb_009252_070 Hb_011709_010--Hb_005269_060 Hb_011709_010--Hb_057862_010 Hb_002925_060 Hb_002925_060 Hb_000620_050--Hb_002925_060 Hb_184074_010 Hb_184074_010 Hb_000620_050--Hb_184074_010 Hb_003371_280 Hb_003371_280 Hb_000620_050--Hb_003371_280 Hb_182869_010 Hb_182869_010 Hb_000620_050--Hb_182869_010 Hb_003058_240 Hb_003058_240 Hb_000620_050--Hb_003058_240 Hb_011519_040 Hb_011519_040 Hb_000620_050--Hb_011519_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0114799 0.12074 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0104649 0.0546728

CAGE analysis