Hb_031658_040

Information

Type -
Description -
Location Contig31658: 104928-106075
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031658_040 0.0 - - -
2 Hb_006618_050 0.1051592001 - - PREDICTED: elongation factor G-2, chloroplastic [Jatropha curcas]
3 Hb_002368_070 0.1184540054 - - PREDICTED: uncharacterized protein LOC105634087 [Jatropha curcas]
4 Hb_065408_010 0.1317579923 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Jatropha curcas]
5 Hb_003506_050 0.1363596704 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
6 Hb_001366_160 0.1363731631 - - -
7 Hb_015026_080 0.1364314356 - - -
8 Hb_007545_130 0.1414485626 - - PREDICTED: zinc finger protein VAR3, chloroplastic [Jatropha curcas]
9 Hb_005250_030 0.1454613545 - - PREDICTED: uncharacterized protein LOC105640177 [Jatropha curcas]
10 Hb_011931_060 0.1490267093 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Jatropha curcas]
11 Hb_156279_010 0.150639502 transcription factor TF Family: Jumonji PREDICTED: uncharacterized protein LOC105641053 isoform X1 [Jatropha curcas]
12 Hb_002276_070 0.1549176312 - - PREDICTED: heat shock protein 83 [Jatropha curcas]
13 Hb_003124_100 0.1560129304 - - -
14 Hb_000345_330 0.1581490132 desease resistance Gene Name: NB-ARC NB-ARC domain-containing disease resistance-like protein isoform 1 [Theobroma cacao]
15 Hb_005211_020 0.1601233195 - - PREDICTED: serine/threonine-protein kinase prpf4B-like isoform X1 [Jatropha curcas]
16 Hb_008123_010 0.1609181396 - - -
17 Hb_001832_040 0.1612060439 - - conserved hypothetical protein [Ricinus communis]
18 Hb_002636_110 0.1632474255 - - PREDICTED: heat shock protein 83-like isoform X2 [Gossypium raimondii]
19 Hb_001623_280 0.1639298417 - - PREDICTED: chaperonin CPN60-2, mitochondrial [Jatropha curcas]
20 Hb_021537_010 0.1644949436 - - PREDICTED: uncharacterized protein LOC105631404 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_031658_040 Hb_031658_040 Hb_006618_050 Hb_006618_050 Hb_031658_040--Hb_006618_050 Hb_002368_070 Hb_002368_070 Hb_031658_040--Hb_002368_070 Hb_065408_010 Hb_065408_010 Hb_031658_040--Hb_065408_010 Hb_003506_050 Hb_003506_050 Hb_031658_040--Hb_003506_050 Hb_001366_160 Hb_001366_160 Hb_031658_040--Hb_001366_160 Hb_015026_080 Hb_015026_080 Hb_031658_040--Hb_015026_080 Hb_006618_050--Hb_003506_050 Hb_005250_030 Hb_005250_030 Hb_006618_050--Hb_005250_030 Hb_007545_130 Hb_007545_130 Hb_006618_050--Hb_007545_130 Hb_000815_170 Hb_000815_170 Hb_006618_050--Hb_000815_170 Hb_156279_010 Hb_156279_010 Hb_006618_050--Hb_156279_010 Hb_006618_050--Hb_002368_070 Hb_011931_060 Hb_011931_060 Hb_002368_070--Hb_011931_060 Hb_002368_070--Hb_005250_030 Hb_002636_110 Hb_002636_110 Hb_002368_070--Hb_002636_110 Hb_001623_280 Hb_001623_280 Hb_002368_070--Hb_001623_280 Hb_007120_060 Hb_007120_060 Hb_065408_010--Hb_007120_060 Hb_005211_020 Hb_005211_020 Hb_065408_010--Hb_005211_020 Hb_065408_010--Hb_002636_110 Hb_001726_100 Hb_001726_100 Hb_065408_010--Hb_001726_100 Hb_000925_090 Hb_000925_090 Hb_065408_010--Hb_000925_090 Hb_001085_030 Hb_001085_030 Hb_065408_010--Hb_001085_030 Hb_003506_050--Hb_007545_130 Hb_002600_060 Hb_002600_060 Hb_003506_050--Hb_002600_060 Hb_003506_050--Hb_000925_090 Hb_000331_560 Hb_000331_560 Hb_003506_050--Hb_000331_560 Hb_003506_050--Hb_005250_030 Hb_001766_040 Hb_001766_040 Hb_001366_160--Hb_001766_040 Hb_000139_150 Hb_000139_150 Hb_001366_160--Hb_000139_150 Hb_001366_160--Hb_002368_070 Hb_001366_160--Hb_065408_010 Hb_001366_160--Hb_015026_080 Hb_001832_040 Hb_001832_040 Hb_015026_080--Hb_001832_040 Hb_002518_120 Hb_002518_120 Hb_015026_080--Hb_002518_120 Hb_000087_140 Hb_000087_140 Hb_015026_080--Hb_000087_140 Hb_015026_080--Hb_005250_030 Hb_000349_240 Hb_000349_240 Hb_015026_080--Hb_000349_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.484294 0.514843 0.251461 0.143713 0.546557 0.400487
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.12502 0.147465 0.0893724 0.516303 1.38913

CAGE analysis