Hb_031685_010

Information

Type transcription factor
Description TF Family: WRKY
Location Contig31685: 2627-7178
Sequence    

Annotation

kegg
ID rcu:RCOM_1250900
description WRKY transcription factor, putative
nr
ID XP_002522247.1
description WRKY transcription factor, putative [Ricinus communis]
swissprot
ID Q9LP56
description Probable WRKY transcription factor 65 OS=Arabidopsis thaliana GN=WRKY65 PE=2 SV=1
trembl
ID B9S8C8
description WRKY transcription factor, putative OS=Ricinus communis GN=RCOM_1250900 PE=4 SV=1
Gene Ontology
ID GO:0003700
description probable wrky transcription factor 65

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33333: 2991-3387
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031685_010 0.0 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
2 Hb_006789_030 0.093487373 - - PREDICTED: wall-associated receptor kinase-like 22 [Prunus mume]
3 Hb_029095_010 0.0936273789 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
4 Hb_000732_160 0.0970292687 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
5 Hb_005888_050 0.0985107789 - - ATP binding protein, putative [Ricinus communis]
6 Hb_003337_020 0.1074987414 - - PREDICTED: uncharacterized protein LOC105116455 [Populus euphratica]
7 Hb_094439_010 0.1100653255 - - PREDICTED: MACPF domain-containing protein At1g14780 [Jatropha curcas]
8 Hb_140000_010 0.110966826 - - receptor-kinase, putative [Ricinus communis]
9 Hb_034585_070 0.1125918526 - - Polyneuridine-aldehyde esterase precursor, putative [Ricinus communis]
10 Hb_000340_380 0.1127069984 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Jatropha curcas]
11 Hb_002596_090 0.1132830651 - - PREDICTED: calcium-transporting ATPase 4, plasma membrane-type-like isoform X1 [Jatropha curcas]
12 Hb_093364_010 0.1177225594 - - PREDICTED: uncharacterized protein LOC105636199 [Jatropha curcas]
13 Hb_135714_010 0.1241650389 - - hypothetical protein POPTR_0017s09310g, partial [Populus trichocarpa]
14 Hb_001898_100 0.1244721983 - - PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Jatropha curcas]
15 Hb_008202_010 0.126817233 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
16 Hb_005486_020 0.1286864517 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
17 Hb_010904_010 0.1301927087 - - PREDICTED: probable receptor-like protein kinase At5g39030 isoform X2 [Jatropha curcas]
18 Hb_002030_090 0.1337899181 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
19 Hb_001544_060 0.146703196 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB4 isoform X2 [Jatropha curcas]
20 Hb_000020_020 0.1470581021 - - hypothetical protein JCGZ_06491 [Jatropha curcas]

Gene co-expression network

sample Hb_031685_010 Hb_031685_010 Hb_006789_030 Hb_006789_030 Hb_031685_010--Hb_006789_030 Hb_029095_010 Hb_029095_010 Hb_031685_010--Hb_029095_010 Hb_000732_160 Hb_000732_160 Hb_031685_010--Hb_000732_160 Hb_005888_050 Hb_005888_050 Hb_031685_010--Hb_005888_050 Hb_003337_020 Hb_003337_020 Hb_031685_010--Hb_003337_020 Hb_094439_010 Hb_094439_010 Hb_031685_010--Hb_094439_010 Hb_010407_150 Hb_010407_150 Hb_006789_030--Hb_010407_150 Hb_006789_030--Hb_029095_010 Hb_001544_060 Hb_001544_060 Hb_006789_030--Hb_001544_060 Hb_034585_070 Hb_034585_070 Hb_006789_030--Hb_034585_070 Hb_001898_100 Hb_001898_100 Hb_006789_030--Hb_001898_100 Hb_093364_010 Hb_093364_010 Hb_029095_010--Hb_093364_010 Hb_005486_020 Hb_005486_020 Hb_029095_010--Hb_005486_020 Hb_000990_040 Hb_000990_040 Hb_029095_010--Hb_000990_040 Hb_002596_090 Hb_002596_090 Hb_029095_010--Hb_002596_090 Hb_004611_050 Hb_004611_050 Hb_029095_010--Hb_004611_050 Hb_010614_010 Hb_010614_010 Hb_000732_160--Hb_010614_010 Hb_000732_160--Hb_094439_010 Hb_010904_010 Hb_010904_010 Hb_000732_160--Hb_010904_010 Hb_001631_110 Hb_001631_110 Hb_000732_160--Hb_001631_110 Hb_004241_170 Hb_004241_170 Hb_000732_160--Hb_004241_170 Hb_135714_010 Hb_135714_010 Hb_005888_050--Hb_135714_010 Hb_074966_010 Hb_074966_010 Hb_005888_050--Hb_074966_010 Hb_001926_020 Hb_001926_020 Hb_005888_050--Hb_001926_020 Hb_008202_010 Hb_008202_010 Hb_005888_050--Hb_008202_010 Hb_006188_020 Hb_006188_020 Hb_005888_050--Hb_006188_020 Hb_000265_170 Hb_000265_170 Hb_003337_020--Hb_000265_170 Hb_063405_010 Hb_063405_010 Hb_003337_020--Hb_063405_010 Hb_000697_020 Hb_000697_020 Hb_003337_020--Hb_000697_020 Hb_003337_020--Hb_001544_060 Hb_003337_020--Hb_005888_050 Hb_003337_020--Hb_001898_100 Hb_007113_020 Hb_007113_020 Hb_094439_010--Hb_007113_020 Hb_094439_010--Hb_010614_010 Hb_094439_010--Hb_029095_010 Hb_094439_010--Hb_093364_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 21.9268 45.6983 6.92844 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0803129 0 6.39585 23.8133

CAGE analysis