Hb_032050_050

Information

Type -
Description -
Location Contig32050: 37002-39636
Sequence    

Annotation

kegg
ID tcc:TCM_035691
description Peroxidase
nr
ID XP_012073952.1
description PREDICTED: peroxidase 12-like [Jatropha curcas]
swissprot
ID Q96520
description Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1
trembl
ID A0A067KK07
description Peroxidase OS=Jatropha curcas GN=JCGZ_08343 PE=3 SV=1
Gene Ontology
ID GO:0009505
description peroxidase 12-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33858: 36992-39649
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032050_050 0.0 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
2 Hb_000984_080 0.0983411837 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
3 Hb_002110_270 0.107349932 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH96 [Jatropha curcas]
4 Hb_002150_010 0.1075722893 - - hypothetical protein POPTR_0001s10240g [Populus trichocarpa]
5 Hb_002900_070 0.1160541168 - - conserved hypothetical protein [Ricinus communis]
6 Hb_006006_070 0.1164197076 - - UDP-glucosyltransferase, putative [Ricinus communis]
7 Hb_076895_020 0.1164613234 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X2 [Jatropha curcas]
8 Hb_000580_070 0.1189260657 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
9 Hb_000487_240 0.1192359425 - - PREDICTED: CYSTM1 family protein B [Cucumis melo]
10 Hb_003090_180 0.1206547104 - - PREDICTED: uncharacterized protein LOC105646674 [Jatropha curcas]
11 Hb_000852_050 0.1239136455 - - hypothetical protein POPTR_0018s02450g [Populus trichocarpa]
12 Hb_001405_100 0.1244219735 - - PREDICTED: lysM domain receptor-like kinase 4 [Jatropha curcas]
13 Hb_008225_080 0.1247566125 - - PREDICTED: cytochrome P450 71A26-like [Jatropha curcas]
14 Hb_000441_170 0.1248666636 - - PREDICTED: uncharacterized protein LOC105636851 [Jatropha curcas]
15 Hb_000237_150 0.1258431406 - - Epoxide hydrolase 2 [Morus notabilis]
16 Hb_000556_140 0.1260656106 transcription factor TF Family: GRF PREDICTED: growth-regulating factor 9 [Jatropha curcas]
17 Hb_001104_210 0.1265138158 - - hypothetical protein JCGZ_23620 [Jatropha curcas]
18 Hb_000758_030 0.1288459276 transcription factor TF Family: ERF Ethylene-responsive transcription factor, putative [Ricinus communis]
19 Hb_001838_050 0.1304254478 - - hypothetical protein B456_007G218500 [Gossypium raimondii]
20 Hb_000077_330 0.1315591048 - - PREDICTED: bifunctional epoxide hydrolase 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_032050_050 Hb_032050_050 Hb_000984_080 Hb_000984_080 Hb_032050_050--Hb_000984_080 Hb_002110_270 Hb_002110_270 Hb_032050_050--Hb_002110_270 Hb_002150_010 Hb_002150_010 Hb_032050_050--Hb_002150_010 Hb_002900_070 Hb_002900_070 Hb_032050_050--Hb_002900_070 Hb_006006_070 Hb_006006_070 Hb_032050_050--Hb_006006_070 Hb_076895_020 Hb_076895_020 Hb_032050_050--Hb_076895_020 Hb_000984_080--Hb_076895_020 Hb_000140_260 Hb_000140_260 Hb_000984_080--Hb_000140_260 Hb_000539_080 Hb_000539_080 Hb_000984_080--Hb_000539_080 Hb_000984_080--Hb_002110_270 Hb_000758_030 Hb_000758_030 Hb_000984_080--Hb_000758_030 Hb_000984_080--Hb_006006_070 Hb_002110_270--Hb_006006_070 Hb_002110_270--Hb_000758_030 Hb_002110_270--Hb_076895_020 Hb_002110_270--Hb_000539_080 Hb_002110_270--Hb_002900_070 Hb_002391_350 Hb_002391_350 Hb_002150_010--Hb_002391_350 Hb_000237_150 Hb_000237_150 Hb_002150_010--Hb_000237_150 Hb_000852_050 Hb_000852_050 Hb_002150_010--Hb_000852_050 Hb_001838_050 Hb_001838_050 Hb_002150_010--Hb_001838_050 Hb_088916_010 Hb_088916_010 Hb_002150_010--Hb_088916_010 Hb_000441_170 Hb_000441_170 Hb_002900_070--Hb_000441_170 Hb_000948_070 Hb_000948_070 Hb_002900_070--Hb_000948_070 Hb_002900_070--Hb_006006_070 Hb_002232_400 Hb_002232_400 Hb_002900_070--Hb_002232_400 Hb_002900_070--Hb_076895_020 Hb_006006_070--Hb_076895_020 Hb_006006_070--Hb_000758_030 Hb_006006_070--Hb_002232_400 Hb_006006_070--Hb_000539_080 Hb_006006_070--Hb_000441_170 Hb_076895_020--Hb_000539_080 Hb_027141_010 Hb_027141_010 Hb_076895_020--Hb_027141_010 Hb_076895_020--Hb_000758_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.16539 118.929 32.1596 78.5986 4.55268 5.46227
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.734234 0.699172 0.339991 483.768 27.8689

CAGE analysis