Hb_032202_130

Information

Type -
Description -
Location Contig32202: 88122-89500
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa026717mg
description hypothetical protein
nr
ID XP_012083497.1
description PREDICTED: uncharacterized protein LOC105643062 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K104
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14469 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34085: 88232-89336
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032202_130 0.0 - - PREDICTED: uncharacterized protein LOC105643062 [Jatropha curcas]
2 Hb_000260_610 0.1728837168 - - PREDICTED: cell division cycle 20.1, cofactor of APC complex-like [Jatropha curcas]
3 Hb_034310_010 0.1740588976 - - PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
4 Hb_006775_070 0.1772485473 - - zinc finger protein, putative [Ricinus communis]
5 Hb_000960_120 0.1937108788 - - PREDICTED: cell division cycle 20.1, cofactor of APC complex-like [Jatropha curcas]
6 Hb_013344_010 0.1942092587 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 [Jatropha curcas]
7 Hb_000577_050 0.2002839501 - - -
8 Hb_176472_020 0.2022531973 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003667_020 0.2022599739 - - conserved hypothetical protein 16 [Hevea brasiliensis]
10 Hb_011609_040 0.2102896798 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 40 [Jatropha curcas]
11 Hb_006060_010 0.2151662977 - - PREDICTED: cyclin-A2-2-like [Jatropha curcas]
12 Hb_008959_040 0.2180051923 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
13 Hb_003878_060 0.2236685654 - - hypothetical protein B456_007G326900, partial [Gossypium raimondii]
14 Hb_005211_150 0.2237668699 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1b(c38) isoform X1 [Jatropha curcas]
15 Hb_003599_060 0.224609159 - - calmodulin binding protein, putative [Ricinus communis]
16 Hb_004994_360 0.2248178451 - - PREDICTED: putative ripening-related protein 1 [Populus euphratica]
17 Hb_003119_040 0.22623021 - - PREDICTED: classical arabinogalactan protein 1-like [Populus euphratica]
18 Hb_000656_320 0.2267847851 - - PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like [Jatropha curcas]
19 Hb_000345_410 0.227605704 - - PREDICTED: kinesin-like protein KIFC3 [Jatropha curcas]
20 Hb_008406_100 0.2296588283 - - PREDICTED: protein TPX2 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_032202_130 Hb_032202_130 Hb_000260_610 Hb_000260_610 Hb_032202_130--Hb_000260_610 Hb_034310_010 Hb_034310_010 Hb_032202_130--Hb_034310_010 Hb_006775_070 Hb_006775_070 Hb_032202_130--Hb_006775_070 Hb_000960_120 Hb_000960_120 Hb_032202_130--Hb_000960_120 Hb_013344_010 Hb_013344_010 Hb_032202_130--Hb_013344_010 Hb_000577_050 Hb_000577_050 Hb_032202_130--Hb_000577_050 Hb_000260_610--Hb_013344_010 Hb_006060_010 Hb_006060_010 Hb_000260_610--Hb_006060_010 Hb_007545_110 Hb_007545_110 Hb_000260_610--Hb_007545_110 Hb_002400_050 Hb_002400_050 Hb_000260_610--Hb_002400_050 Hb_003667_020 Hb_003667_020 Hb_000260_610--Hb_003667_020 Hb_004920_050 Hb_004920_050 Hb_000260_610--Hb_004920_050 Hb_000083_110 Hb_000083_110 Hb_034310_010--Hb_000083_110 Hb_123475_020 Hb_123475_020 Hb_034310_010--Hb_123475_020 Hb_011161_030 Hb_011161_030 Hb_034310_010--Hb_011161_030 Hb_173029_030 Hb_173029_030 Hb_034310_010--Hb_173029_030 Hb_004495_010 Hb_004495_010 Hb_034310_010--Hb_004495_010 Hb_176472_020 Hb_176472_020 Hb_006775_070--Hb_176472_020 Hb_000959_190 Hb_000959_190 Hb_006775_070--Hb_000959_190 Hb_006775_070--Hb_000260_610 Hb_012787_030 Hb_012787_030 Hb_006775_070--Hb_012787_030 Hb_000732_030 Hb_000732_030 Hb_006775_070--Hb_000732_030 Hb_002518_200 Hb_002518_200 Hb_006775_070--Hb_002518_200 Hb_000960_120--Hb_013344_010 Hb_001761_010 Hb_001761_010 Hb_000960_120--Hb_001761_010 Hb_022092_040 Hb_022092_040 Hb_000960_120--Hb_022092_040 Hb_002811_210 Hb_002811_210 Hb_000960_120--Hb_002811_210 Hb_000960_120--Hb_006060_010 Hb_008406_100 Hb_008406_100 Hb_000960_120--Hb_008406_100 Hb_013344_010--Hb_006060_010 Hb_001329_010 Hb_001329_010 Hb_013344_010--Hb_001329_010 Hb_000656_320 Hb_000656_320 Hb_013344_010--Hb_000656_320 Hb_013344_010--Hb_008406_100 Hb_000577_050--Hb_000656_320 Hb_000577_050--Hb_006060_010 Hb_001775_090 Hb_001775_090 Hb_000577_050--Hb_001775_090 Hb_003599_060 Hb_003599_060 Hb_000577_050--Hb_003599_060 Hb_002217_370 Hb_002217_370 Hb_000577_050--Hb_002217_370 Hb_001541_190 Hb_001541_190 Hb_000577_050--Hb_001541_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.852991 2.53672 12.8031 5.69662 1.50906 0.30631
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.282261 0.444019 0.478561 0.133734 0.0760104

CAGE analysis