Hb_032264_080

Information

Type -
Description -
Location Contig32264: 67649-68044
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012089927.1
description PREDICTED: uncharacterized protein LOC105648216 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JT19
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02511 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34213: 67508-68077
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032264_080 0.0 - - PREDICTED: uncharacterized protein LOC105648216 [Jatropha curcas]
2 Hb_007592_020 0.2027356231 - - acyltransferase, putative [Ricinus communis]
3 Hb_163839_010 0.2129494611 - - nucleic acid binding protein, putative [Ricinus communis]
4 Hb_002631_320 0.2187577606 - - hypothetical protein JCGZ_22628 [Jatropha curcas]
5 Hb_000088_220 0.2188251119 transcription factor TF Family: zf-HD transcription factor, putative [Ricinus communis]
6 Hb_004724_220 0.2297337966 - - PREDICTED: probable calcium-binding protein CML48 [Jatropha curcas]
7 Hb_000187_030 0.2337713188 - - PREDICTED: cyclin-D4-1-like isoform X2 [Jatropha curcas]
8 Hb_004193_010 0.235627646 - - PREDICTED: uncharacterized protein LOC105650669 [Jatropha curcas]
9 Hb_008725_060 0.2356673993 - - Protein COBRA precursor, putative [Ricinus communis]
10 Hb_000152_510 0.2393439855 - - kinase, putative [Ricinus communis]
11 Hb_000291_030 0.240869243 - - PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Eucalyptus grandis]
12 Hb_000979_060 0.241641689 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Gossypium raimondii]
13 Hb_004800_250 0.2430794141 - - PREDICTED: protein N-lysine methyltransferase METTL21A [Jatropha curcas]
14 Hb_002478_040 0.2453914941 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 2C, putative [Ricinus communis]
15 Hb_000866_280 0.2455987642 - - PREDICTED: seven transmembrane domain-containing tyrosine-protein kinase 1-like [Jatropha curcas]
16 Hb_002974_040 0.2456558387 - - GRF zinc finger containing protein [Medicago truncatula]
17 Hb_000521_140 0.2457610653 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
18 Hb_000343_150 0.245807957 - - PREDICTED: MAR-binding filament-like protein 1-1 [Jatropha curcas]
19 Hb_000512_010 0.2463231318 - - PREDICTED: uncharacterized protein LOC105650728 [Jatropha curcas]
20 Hb_004204_050 0.2464124506 - - UDP-glucuronosyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_032264_080 Hb_032264_080 Hb_007592_020 Hb_007592_020 Hb_032264_080--Hb_007592_020 Hb_163839_010 Hb_163839_010 Hb_032264_080--Hb_163839_010 Hb_002631_320 Hb_002631_320 Hb_032264_080--Hb_002631_320 Hb_000088_220 Hb_000088_220 Hb_032264_080--Hb_000088_220 Hb_004724_220 Hb_004724_220 Hb_032264_080--Hb_004724_220 Hb_000187_030 Hb_000187_030 Hb_032264_080--Hb_000187_030 Hb_025214_090 Hb_025214_090 Hb_007592_020--Hb_025214_090 Hb_000152_510 Hb_000152_510 Hb_007592_020--Hb_000152_510 Hb_000181_410 Hb_000181_410 Hb_007592_020--Hb_000181_410 Hb_005883_070 Hb_005883_070 Hb_007592_020--Hb_005883_070 Hb_008725_060 Hb_008725_060 Hb_007592_020--Hb_008725_060 Hb_004635_030 Hb_004635_030 Hb_163839_010--Hb_004635_030 Hb_002478_040 Hb_002478_040 Hb_163839_010--Hb_002478_040 Hb_000904_130 Hb_000904_130 Hb_163839_010--Hb_000904_130 Hb_163839_010--Hb_004724_220 Hb_005194_020 Hb_005194_020 Hb_163839_010--Hb_005194_020 Hb_000291_030 Hb_000291_030 Hb_002631_320--Hb_000291_030 Hb_004204_050 Hb_004204_050 Hb_002631_320--Hb_004204_050 Hb_002631_320--Hb_004635_030 Hb_002631_320--Hb_002478_040 Hb_001377_360 Hb_001377_360 Hb_002631_320--Hb_001377_360 Hb_000011_050 Hb_000011_050 Hb_002631_320--Hb_000011_050 Hb_000369_010 Hb_000369_010 Hb_000088_220--Hb_000369_010 Hb_005725_200 Hb_005725_200 Hb_000088_220--Hb_005725_200 Hb_004342_020 Hb_004342_020 Hb_000088_220--Hb_004342_020 Hb_006671_020 Hb_006671_020 Hb_000088_220--Hb_006671_020 Hb_000120_250 Hb_000120_250 Hb_000088_220--Hb_000120_250 Hb_004724_220--Hb_001377_360 Hb_004724_220--Hb_000291_030 Hb_004724_220--Hb_005194_020 Hb_004648_090 Hb_004648_090 Hb_004724_220--Hb_004648_090 Hb_000979_060 Hb_000979_060 Hb_004724_220--Hb_000979_060 Hb_004724_220--Hb_004635_030 Hb_000152_150 Hb_000152_150 Hb_000187_030--Hb_000152_150 Hb_000187_030--Hb_004724_220 Hb_000617_310 Hb_000617_310 Hb_000187_030--Hb_000617_310 Hb_006261_090 Hb_006261_090 Hb_000187_030--Hb_006261_090 Hb_000187_030--Hb_004648_090 Hb_001307_190 Hb_001307_190 Hb_000187_030--Hb_001307_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.94453 4.07617 6.09463 0.895146 3.37763 0.0918389
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.475732 2.61642 3.4828 1.79853 0.317872

CAGE analysis