Hb_032299_050

Information

Type -
Description -
Location Contig32299: 36056-37082
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032299_050 0.0 - - -
2 Hb_003371_240 0.2211682496 - - hypothetical protein JCGZ_16702 [Jatropha curcas]
3 Hb_000836_200 0.2603370018 - - -
4 Hb_003861_130 0.3346314673 - - -
5 Hb_001623_030 0.3363650715 - - serine/threonine protein kinase, putative [Ricinus communis]
6 Hb_004102_120 0.3374270919 - - -
7 Hb_094245_010 0.3399629162 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
8 Hb_135978_010 0.3411152353 - - hypothetical protein EUGRSUZ_J026621, partial [Eucalyptus grandis]
9 Hb_062827_010 0.3599083892 - - -
10 Hb_011692_030 0.3793663867 - - PREDICTED: uncharacterized protein LOC105775392, partial [Gossypium raimondii]
11 Hb_020763_020 0.3798161961 - - hypothetical protein POPTR_0001s27010g [Populus trichocarpa]
12 Hb_000167_020 0.396047356 - - -
13 Hb_003041_040 0.3965630044 - - PREDICTED: uncharacterized protein LOC104908276 [Beta vulgaris subsp. vulgaris]
14 Hb_011360_030 0.3965946131 - - zinc finger protein, putative [Ricinus communis]
15 Hb_004732_010 0.4104040326 - - -
16 Hb_006452_130 0.41251402 - - -
17 Hb_047287_040 0.420323489 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
18 Hb_002234_110 0.4217448593 - - PREDICTED: uncharacterized protein LOC103455142 [Malus domestica]
19 Hb_002316_040 0.4294427615 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
20 Hb_007181_040 0.4323813289 - - -

Gene co-expression network

sample Hb_032299_050 Hb_032299_050 Hb_003371_240 Hb_003371_240 Hb_032299_050--Hb_003371_240 Hb_000836_200 Hb_000836_200 Hb_032299_050--Hb_000836_200 Hb_003861_130 Hb_003861_130 Hb_032299_050--Hb_003861_130 Hb_001623_030 Hb_001623_030 Hb_032299_050--Hb_001623_030 Hb_004102_120 Hb_004102_120 Hb_032299_050--Hb_004102_120 Hb_094245_010 Hb_094245_010 Hb_032299_050--Hb_094245_010 Hb_003371_240--Hb_094245_010 Hb_011037_010 Hb_011037_010 Hb_003371_240--Hb_011037_010 Hb_003058_050 Hb_003058_050 Hb_003371_240--Hb_003058_050 Hb_002099_020 Hb_002099_020 Hb_003371_240--Hb_002099_020 Hb_000205_170 Hb_000205_170 Hb_003371_240--Hb_000205_170 Hb_000889_090 Hb_000889_090 Hb_000836_200--Hb_000889_090 Hb_004732_010 Hb_004732_010 Hb_000836_200--Hb_004732_010 Hb_001059_020 Hb_001059_020 Hb_000836_200--Hb_001059_020 Hb_002534_110 Hb_002534_110 Hb_000836_200--Hb_002534_110 Hb_006452_130 Hb_006452_130 Hb_000836_200--Hb_006452_130 Hb_003861_130--Hb_001623_030 Hb_003861_130--Hb_004102_120 Hb_135978_010 Hb_135978_010 Hb_003861_130--Hb_135978_010 Hb_062827_010 Hb_062827_010 Hb_003861_130--Hb_062827_010 Hb_011692_030 Hb_011692_030 Hb_003861_130--Hb_011692_030 Hb_020763_020 Hb_020763_020 Hb_003861_130--Hb_020763_020 Hb_001623_030--Hb_135978_010 Hb_001623_030--Hb_004102_120 Hb_001623_030--Hb_062827_010 Hb_001623_030--Hb_011692_030 Hb_001623_030--Hb_020763_020 Hb_004102_120--Hb_062827_010 Hb_004102_120--Hb_135978_010 Hb_004102_120--Hb_011692_030 Hb_004102_120--Hb_020763_020 Hb_082730_010 Hb_082730_010 Hb_094245_010--Hb_082730_010 Hb_004297_060 Hb_004297_060 Hb_094245_010--Hb_004297_060 Hb_148908_020 Hb_148908_020 Hb_094245_010--Hb_148908_020 Hb_000608_130 Hb_000608_130 Hb_094245_010--Hb_000608_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0879638 0.177031 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.160516 0 0 0 0

CAGE analysis