Hb_032299_070

Information

Type -
Description -
Location Contig32299: 63293-64468
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032299_070 0.0 - - -
2 Hb_000959_370 0.1223017787 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
3 Hb_044313_010 0.1223860818 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005618_110 0.1389068525 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
5 Hb_002142_010 0.1474557877 - - conserved hypothetical protein [Ricinus communis]
6 Hb_006013_030 0.1504119299 - - -
7 Hb_011242_070 0.1564635494 - - beta-cyanoalanine synthase [Hevea brasiliensis]
8 Hb_002585_060 0.1641197689 - - PREDICTED: uncharacterized protein LOC104899128, partial [Beta vulgaris subsp. vulgaris]
9 Hb_028872_040 0.1682440494 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_005765_020 0.1683623973 - - -
11 Hb_006475_020 0.169942646 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
12 Hb_010813_030 0.1711378951 - - PREDICTED: indole-3-acetaldehyde oxidase-like [Jatropha curcas]
13 Hb_148121_030 0.1722567704 - - PREDICTED: zinc-finger homeodomain protein 14 [Gossypium raimondii]
14 Hb_000280_120 0.1762484673 - - PREDICTED: uncharacterized protein LOC105643934 [Jatropha curcas]
15 Hb_018212_020 0.1792867611 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
16 Hb_019641_020 0.181350293 - - hypothetical protein AALP_AAs49670U000100, partial [Arabis alpina]
17 Hb_000600_080 0.18421517 - - -
18 Hb_138667_010 0.1844483414 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
19 Hb_151694_010 0.1889237451 - - PREDICTED: BURP domain-containing protein 17-like isoform X2 [Jatropha curcas]
20 Hb_002733_050 0.18920761 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]

Gene co-expression network

sample Hb_032299_070 Hb_032299_070 Hb_000959_370 Hb_000959_370 Hb_032299_070--Hb_000959_370 Hb_044313_010 Hb_044313_010 Hb_032299_070--Hb_044313_010 Hb_005618_110 Hb_005618_110 Hb_032299_070--Hb_005618_110 Hb_002142_010 Hb_002142_010 Hb_032299_070--Hb_002142_010 Hb_006013_030 Hb_006013_030 Hb_032299_070--Hb_006013_030 Hb_011242_070 Hb_011242_070 Hb_032299_070--Hb_011242_070 Hb_000959_370--Hb_006013_030 Hb_002733_050 Hb_002733_050 Hb_000959_370--Hb_002733_050 Hb_000600_080 Hb_000600_080 Hb_000959_370--Hb_000600_080 Hb_000280_120 Hb_000280_120 Hb_000959_370--Hb_000280_120 Hb_072173_010 Hb_072173_010 Hb_000959_370--Hb_072173_010 Hb_006475_020 Hb_006475_020 Hb_044313_010--Hb_006475_020 Hb_044313_010--Hb_002142_010 Hb_044313_010--Hb_000959_370 Hb_151694_010 Hb_151694_010 Hb_044313_010--Hb_151694_010 Hb_028872_040 Hb_028872_040 Hb_044313_010--Hb_028872_040 Hb_000254_150 Hb_000254_150 Hb_005618_110--Hb_000254_150 Hb_040963_010 Hb_040963_010 Hb_005618_110--Hb_040963_010 Hb_148121_030 Hb_148121_030 Hb_005618_110--Hb_148121_030 Hb_000149_120 Hb_000149_120 Hb_005618_110--Hb_000149_120 Hb_002740_170 Hb_002740_170 Hb_005618_110--Hb_002740_170 Hb_002142_010--Hb_151694_010 Hb_007709_020 Hb_007709_020 Hb_002142_010--Hb_007709_020 Hb_002142_010--Hb_028872_040 Hb_138667_010 Hb_138667_010 Hb_002142_010--Hb_138667_010 Hb_002142_010--Hb_000280_120 Hb_006013_030--Hb_002733_050 Hb_114121_010 Hb_114121_010 Hb_006013_030--Hb_114121_010 Hb_006013_030--Hb_000280_120 Hb_168909_010 Hb_168909_010 Hb_006013_030--Hb_168909_010 Hb_020400_010 Hb_020400_010 Hb_006013_030--Hb_020400_010 Hb_011242_070--Hb_000600_080 Hb_002585_060 Hb_002585_060 Hb_011242_070--Hb_002585_060 Hb_011242_070--Hb_000959_370 Hb_000236_430 Hb_000236_430 Hb_011242_070--Hb_000236_430 Hb_002815_040 Hb_002815_040 Hb_011242_070--Hb_002815_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.194154 0.0161434 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.280348 0.226545

CAGE analysis