Hb_032496_020

Information

Type -
Description -
Location Contig32496: 47544-47992
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032496_020 0.0 - - -
2 Hb_000414_030 0.1772914129 - - -
3 Hb_001105_190 0.2092903682 - - peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
4 Hb_000062_420 0.2124729411 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002639_060 0.2177225391 - - -
6 Hb_002067_020 0.224035893 - - conserved hypothetical protein [Ricinus communis]
7 Hb_007426_160 0.2274631848 - - -
8 Hb_000015_210 0.2284421777 - - PREDICTED: uncharacterized protein LOC105647781 [Jatropha curcas]
9 Hb_000950_080 0.2285552361 - - PREDICTED: uncharacterized protein LOC102611758 [Citrus sinensis]
10 Hb_004724_190 0.228786755 - - NITRILASE-LIKE protein 1 [Populus trichocarpa]
11 Hb_094947_010 0.2299490646 - - surfeit locus protein, putative [Ricinus communis]
12 Hb_000982_110 0.2308297875 - - PREDICTED: chaperonin CPN60-2, mitochondrial-like [Jatropha curcas]
13 Hb_032458_010 0.2319570436 - - hypothetical protein JCGZ_21107 [Jatropha curcas]
14 Hb_022092_090 0.2321640434 - - PREDICTED: uncharacterized protein LOC105646975 [Jatropha curcas]
15 Hb_000523_090 0.2323431282 - - PREDICTED: protein DJ-1 homolog D-like [Populus euphratica]
16 Hb_000093_080 0.2351815842 - - hypothetical protein POPTR_0008s09730g [Populus trichocarpa]
17 Hb_006692_030 0.2371373069 - - PREDICTED: uncharacterized protein LOC105632913 [Jatropha curcas]
18 Hb_009133_010 0.2379870335 - - PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Jatropha curcas]
19 Hb_005608_030 0.2383456863 - - PREDICTED: uncharacterized protein LOC104110884 [Nicotiana tomentosiformis]
20 Hb_003786_020 0.2386909908 - - PREDICTED: BTB/POZ domain-containing protein At3g50780 [Jatropha curcas]

Gene co-expression network

sample Hb_032496_020 Hb_032496_020 Hb_000414_030 Hb_000414_030 Hb_032496_020--Hb_000414_030 Hb_001105_190 Hb_001105_190 Hb_032496_020--Hb_001105_190 Hb_000062_420 Hb_000062_420 Hb_032496_020--Hb_000062_420 Hb_002639_060 Hb_002639_060 Hb_032496_020--Hb_002639_060 Hb_002067_020 Hb_002067_020 Hb_032496_020--Hb_002067_020 Hb_007426_160 Hb_007426_160 Hb_032496_020--Hb_007426_160 Hb_000878_130 Hb_000878_130 Hb_000414_030--Hb_000878_130 Hb_000414_030--Hb_001105_190 Hb_001054_130 Hb_001054_130 Hb_000414_030--Hb_001054_130 Hb_000329_770 Hb_000329_770 Hb_000414_030--Hb_000329_770 Hb_015057_010 Hb_015057_010 Hb_000414_030--Hb_015057_010 Hb_006570_020 Hb_006570_020 Hb_001105_190--Hb_006570_020 Hb_002107_160 Hb_002107_160 Hb_001105_190--Hb_002107_160 Hb_000563_210 Hb_000563_210 Hb_001105_190--Hb_000563_210 Hb_000573_070 Hb_000573_070 Hb_001105_190--Hb_000573_070 Hb_001105_190--Hb_001054_130 Hb_000076_120 Hb_000076_120 Hb_001105_190--Hb_000076_120 Hb_000364_150 Hb_000364_150 Hb_000062_420--Hb_000364_150 Hb_022092_090 Hb_022092_090 Hb_000062_420--Hb_022092_090 Hb_002197_030 Hb_002197_030 Hb_000062_420--Hb_002197_030 Hb_094947_010 Hb_094947_010 Hb_000062_420--Hb_094947_010 Hb_009543_030 Hb_009543_030 Hb_000062_420--Hb_009543_030 Hb_009558_020 Hb_009558_020 Hb_000062_420--Hb_009558_020 Hb_007926_040 Hb_007926_040 Hb_002639_060--Hb_007926_040 Hb_002205_050 Hb_002205_050 Hb_002639_060--Hb_002205_050 Hb_007101_200 Hb_007101_200 Hb_002639_060--Hb_007101_200 Hb_009543_020 Hb_009543_020 Hb_002639_060--Hb_009543_020 Hb_003786_020 Hb_003786_020 Hb_002639_060--Hb_003786_020 Hb_000523_090 Hb_000523_090 Hb_002067_020--Hb_000523_090 Hb_000364_080 Hb_000364_080 Hb_002067_020--Hb_000364_080 Hb_031862_180 Hb_031862_180 Hb_002067_020--Hb_031862_180 Hb_003363_010 Hb_003363_010 Hb_002067_020--Hb_003363_010 Hb_000364_060 Hb_000364_060 Hb_002067_020--Hb_000364_060 Hb_134364_010 Hb_134364_010 Hb_002067_020--Hb_134364_010 Hb_000012_460 Hb_000012_460 Hb_007426_160--Hb_000012_460 Hb_001439_060 Hb_001439_060 Hb_007426_160--Hb_001439_060 Hb_000932_100 Hb_000932_100 Hb_007426_160--Hb_000932_100 Hb_000160_320 Hb_000160_320 Hb_007426_160--Hb_000160_320 Hb_000630_040 Hb_000630_040 Hb_007426_160--Hb_000630_040 Hb_150379_010 Hb_150379_010 Hb_007426_160--Hb_150379_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.9972 0.964509 0.714372 0 2.58285 12.7106
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.76562 5.95016 1.99221 2.27346 5.43952

CAGE analysis