Hb_032631_040

Information

Type -
Description -
Location Contig32631: 19420-21596
Sequence    

Annotation

kegg
ID pop:POPTR_0004s09470g
description POPTRDRAFT_555887; hypothetical protein
nr
ID XP_012078017.1
description PREDICTED: uncharacterized protein LOC105638769 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K9T9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13042 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34324: 19703-21024
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032631_040 0.0 - - PREDICTED: uncharacterized protein LOC105638769 [Jatropha curcas]
2 Hb_002551_070 0.0700726546 - - hypothetical protein POPTR_0019s10130g [Populus trichocarpa]
3 Hb_003623_030 0.0803746849 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 14 [Jatropha curcas]
4 Hb_117552_010 0.0840497471 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
5 Hb_009476_040 0.0847465415 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002974_060 0.0917508731 - - PREDICTED: transcription initiation factor TFIID subunit 15b isoform X2 [Jatropha curcas]
7 Hb_005701_070 0.0918234728 - - PREDICTED: uncharacterized TPR repeat-containing protein At1g05150-like [Jatropha curcas]
8 Hb_007576_120 0.096908247 - - NBS-LRR disease resistance protein NBS49 [Dimocarpus longan]
9 Hb_003656_180 0.0992697772 - - PREDICTED: uncharacterized protein LOC105637927 [Jatropha curcas]
10 Hb_000183_020 0.099632726 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 38 isoform X1 [Jatropha curcas]
11 Hb_116929_010 0.0996709949 - - PREDICTED: nuclear-pore anchor isoform X2 [Jatropha curcas]
12 Hb_001493_040 0.1003914519 - - PREDICTED: FACT complex subunit SPT16-like [Jatropha curcas]
13 Hb_002235_160 0.1007340959 - - PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10 [Jatropha curcas]
14 Hb_002028_170 0.1028633538 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 5 [Jatropha curcas]
15 Hb_000922_370 0.1031137797 - - PREDICTED: uncharacterized protein LOC105640366 [Jatropha curcas]
16 Hb_000158_100 0.1036318891 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001322_210 0.1041052616 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like [Jatropha curcas]
18 Hb_007805_010 0.1051509255 - - PREDICTED: ribosome biogenesis protein BMS1 homolog [Jatropha curcas]
19 Hb_001700_040 0.105456355 - - PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1 [Jatropha curcas]
20 Hb_002493_020 0.1054821475 - - PREDICTED: uncharacterized protein At4g26450 isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_032631_040 Hb_032631_040 Hb_002551_070 Hb_002551_070 Hb_032631_040--Hb_002551_070 Hb_003623_030 Hb_003623_030 Hb_032631_040--Hb_003623_030 Hb_117552_010 Hb_117552_010 Hb_032631_040--Hb_117552_010 Hb_009476_040 Hb_009476_040 Hb_032631_040--Hb_009476_040 Hb_002974_060 Hb_002974_060 Hb_032631_040--Hb_002974_060 Hb_005701_070 Hb_005701_070 Hb_032631_040--Hb_005701_070 Hb_002551_070--Hb_003623_030 Hb_002551_070--Hb_002974_060 Hb_003966_030 Hb_003966_030 Hb_002551_070--Hb_003966_030 Hb_000183_020 Hb_000183_020 Hb_002551_070--Hb_000183_020 Hb_048476_180 Hb_048476_180 Hb_002551_070--Hb_048476_180 Hb_002028_170 Hb_002028_170 Hb_003623_030--Hb_002028_170 Hb_000107_040 Hb_000107_040 Hb_003623_030--Hb_000107_040 Hb_000158_100 Hb_000158_100 Hb_003623_030--Hb_000158_100 Hb_116929_010 Hb_116929_010 Hb_003623_030--Hb_116929_010 Hb_003656_180 Hb_003656_180 Hb_117552_010--Hb_003656_180 Hb_002301_080 Hb_002301_080 Hb_117552_010--Hb_002301_080 Hb_002235_160 Hb_002235_160 Hb_117552_010--Hb_002235_160 Hb_001493_040 Hb_001493_040 Hb_117552_010--Hb_001493_040 Hb_002400_240 Hb_002400_240 Hb_117552_010--Hb_002400_240 Hb_000922_370 Hb_000922_370 Hb_117552_010--Hb_000922_370 Hb_009476_040--Hb_000183_020 Hb_009476_040--Hb_000922_370 Hb_025194_040 Hb_025194_040 Hb_009476_040--Hb_025194_040 Hb_074969_010 Hb_074969_010 Hb_009476_040--Hb_074969_010 Hb_007426_130 Hb_007426_130 Hb_009476_040--Hb_007426_130 Hb_002784_110 Hb_002784_110 Hb_009476_040--Hb_002784_110 Hb_011716_020 Hb_011716_020 Hb_002974_060--Hb_011716_020 Hb_002600_140 Hb_002600_140 Hb_002974_060--Hb_002600_140 Hb_001496_070 Hb_001496_070 Hb_002974_060--Hb_001496_070 Hb_000446_120 Hb_000446_120 Hb_002974_060--Hb_000446_120 Hb_002974_060--Hb_116929_010 Hb_005701_070--Hb_000446_120 Hb_030627_060 Hb_030627_060 Hb_005701_070--Hb_030627_060 Hb_005701_070--Hb_002400_240 Hb_005701_070--Hb_002784_110 Hb_000406_020 Hb_000406_020 Hb_005701_070--Hb_000406_020 Hb_005701_070--Hb_025194_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.0093 10.8793 3.16911 5.63708 8.70968 19.9956
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.5194 3.40676 6.3363 10.6047 11.1819

CAGE analysis