Hb_032631_050

Information

Type -
Description -
Location Contig32631: 26712-29109
Sequence    

Annotation

kegg
ID rcu:RCOM_0468520
description ATP binding protein, putative (EC:1.3.1.74)
nr
ID XP_012078013.1
description PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
swissprot
ID Q9C9N5
description Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 OS=Arabidopsis thaliana GN=At1g66830 PE=2 SV=1
trembl
ID A0A067KL57
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13041 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable inactive leucine-rich repeat receptor-like protein kinase at1g66830

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032631_050 0.0 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
2 Hb_000421_270 0.1051963702 transcription factor TF Family: LOB LOB domain-containing protein 1 [Theobroma cacao]
3 Hb_001348_210 0.1355450588 - - defensin protein precursor [Capsicum annuum]
4 Hb_011200_020 0.1370904711 - - aldo-keto reductase, putative [Ricinus communis]
5 Hb_000963_200 0.1382211559 - - beta-galactosidase, putative [Ricinus communis]
6 Hb_002025_350 0.1411428826 - - PREDICTED: glutamate decarboxylase 4 [Jatropha curcas]
7 Hb_029584_090 0.1420117535 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
8 Hb_000181_160 0.1475333982 - - PREDICTED: uncharacterized protein LOC105637575 isoform X2 [Jatropha curcas]
9 Hb_004657_040 0.1581338324 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
10 Hb_000029_370 0.1599211162 - - multidrug resistance pump, putative [Ricinus communis]
11 Hb_001408_050 0.1666094062 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002835_350 0.1670429222 - - PREDICTED: uncharacterized protein LOC105640319 [Jatropha curcas]
13 Hb_000005_230 0.1674503751 - - hypothetical protein POPTR_0009s01160g [Populus trichocarpa]
14 Hb_000098_310 0.1688306534 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
15 Hb_001454_410 0.1703080125 - - PREDICTED: uncharacterized protein LOC105643453 [Jatropha curcas]
16 Hb_002750_010 0.1705153071 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
17 Hb_004195_090 0.1710687684 - - PREDICTED: probable mitochondrial chaperone bcs1 [Jatropha curcas]
18 Hb_000152_810 0.1734953528 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
19 Hb_000116_590 0.1765694515 - - PREDICTED: splicing factor, suppressor of white-apricot homolog [Malus domestica]
20 Hb_001021_030 0.1777563078 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]

Gene co-expression network

sample Hb_032631_050 Hb_032631_050 Hb_000421_270 Hb_000421_270 Hb_032631_050--Hb_000421_270 Hb_001348_210 Hb_001348_210 Hb_032631_050--Hb_001348_210 Hb_011200_020 Hb_011200_020 Hb_032631_050--Hb_011200_020 Hb_000963_200 Hb_000963_200 Hb_032631_050--Hb_000963_200 Hb_002025_350 Hb_002025_350 Hb_032631_050--Hb_002025_350 Hb_029584_090 Hb_029584_090 Hb_032631_050--Hb_029584_090 Hb_000421_270--Hb_002025_350 Hb_000116_590 Hb_000116_590 Hb_000421_270--Hb_000116_590 Hb_000421_270--Hb_011200_020 Hb_000421_270--Hb_029584_090 Hb_000421_270--Hb_000963_200 Hb_001348_210--Hb_000421_270 Hb_000181_160 Hb_000181_160 Hb_001348_210--Hb_000181_160 Hb_003602_070 Hb_003602_070 Hb_001348_210--Hb_003602_070 Hb_001348_210--Hb_000116_590 Hb_000098_310 Hb_000098_310 Hb_001348_210--Hb_000098_310 Hb_011200_020--Hb_000098_310 Hb_001504_220 Hb_001504_220 Hb_011200_020--Hb_001504_220 Hb_032225_040 Hb_032225_040 Hb_011200_020--Hb_032225_040 Hb_031042_030 Hb_031042_030 Hb_011200_020--Hb_031042_030 Hb_000034_030 Hb_000034_030 Hb_000963_200--Hb_000034_030 Hb_000963_200--Hb_029584_090 Hb_006594_060 Hb_006594_060 Hb_000963_200--Hb_006594_060 Hb_003453_030 Hb_003453_030 Hb_000963_200--Hb_003453_030 Hb_000963_200--Hb_011200_020 Hb_000227_370 Hb_000227_370 Hb_002025_350--Hb_000227_370 Hb_002025_350--Hb_029584_090 Hb_000005_230 Hb_000005_230 Hb_002025_350--Hb_000005_230 Hb_001405_150 Hb_001405_150 Hb_002025_350--Hb_001405_150 Hb_004495_020 Hb_004495_020 Hb_029584_090--Hb_004495_020 Hb_001341_200 Hb_001341_200 Hb_029584_090--Hb_001341_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0313478 0.858151 0.383539 0.868793 0.0090228 0.0157646
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.163745 0.241581 0.0612203 2.4713 0.136483

CAGE analysis