Hb_032844_020

Information

Type -
Description -
Location Contig32844: 14604-15724
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032844_020 0.0 - - -
2 Hb_002471_200 0.2426398054 - - hypothetical protein POPTR_0010s11380g [Populus trichocarpa]
3 Hb_000138_010 0.2447970861 - - hypothetical protein RCOM_0504460 [Ricinus communis]
4 Hb_007765_060 0.2515475007 - - Proliferating cell nuclear antigen [Theobroma cacao]
5 Hb_001408_090 0.2516015764 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
6 Hb_022749_030 0.2553446508 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
7 Hb_000453_190 0.2666172308 transcription factor TF Family: MYB PREDICTED: transcription factor GAMYB-like [Jatropha curcas]
8 Hb_000297_110 0.2668995758 - - PREDICTED: uncharacterized protein LOC105634718 [Jatropha curcas]
9 Hb_006831_100 0.2677779364 - - snRNA-activating protein complex subunit, putative [Ricinus communis]
10 Hb_009421_100 0.2681180911 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os01g0234100-like [Jatropha curcas]
11 Hb_096962_020 0.2700373639 - - -
12 Hb_000922_420 0.2706521168 - - glutaredoxin-1, grx1, putative [Ricinus communis]
13 Hb_000345_530 0.2713170548 - - PREDICTED: uncharacterized protein LOC105647554 isoform X1 [Jatropha curcas]
14 Hb_005322_030 0.2743557528 - - PREDICTED: rRNA-processing protein UTP23 homolog [Jatropha curcas]
15 Hb_002897_040 0.2750697044 - - PREDICTED: LOW QUALITY PROTEIN: protein NETWORKED 4A [Jatropha curcas]
16 Hb_002783_120 0.2752685357 - - PREDICTED: uncharacterized protein LOC105635329 [Jatropha curcas]
17 Hb_002205_120 0.2761381579 - - PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 isoform X1 [Jatropha curcas]
18 Hb_000025_750 0.2785056718 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]
19 Hb_004117_030 0.2799476618 - - PREDICTED: uncharacterized protein LOC104449809 [Eucalyptus grandis]
20 Hb_000613_020 0.2801915098 - - PREDICTED: U-box domain-containing protein 15 [Jatropha curcas]

Gene co-expression network

sample Hb_032844_020 Hb_032844_020 Hb_002471_200 Hb_002471_200 Hb_032844_020--Hb_002471_200 Hb_000138_010 Hb_000138_010 Hb_032844_020--Hb_000138_010 Hb_007765_060 Hb_007765_060 Hb_032844_020--Hb_007765_060 Hb_001408_090 Hb_001408_090 Hb_032844_020--Hb_001408_090 Hb_022749_030 Hb_022749_030 Hb_032844_020--Hb_022749_030 Hb_000453_190 Hb_000453_190 Hb_032844_020--Hb_000453_190 Hb_085226_010 Hb_085226_010 Hb_002471_200--Hb_085226_010 Hb_001956_050 Hb_001956_050 Hb_002471_200--Hb_001956_050 Hb_004117_030 Hb_004117_030 Hb_002471_200--Hb_004117_030 Hb_073973_170 Hb_073973_170 Hb_002471_200--Hb_073973_170 Hb_002471_200--Hb_007765_060 Hb_007741_170 Hb_007741_170 Hb_002471_200--Hb_007741_170 Hb_001141_080 Hb_001141_080 Hb_000138_010--Hb_001141_080 Hb_005147_110 Hb_005147_110 Hb_000138_010--Hb_005147_110 Hb_000282_150 Hb_000282_150 Hb_000138_010--Hb_000282_150 Hb_018663_020 Hb_018663_020 Hb_000138_010--Hb_018663_020 Hb_001341_030 Hb_001341_030 Hb_000138_010--Hb_001341_030 Hb_000500_290 Hb_000500_290 Hb_000138_010--Hb_000500_290 Hb_000740_070 Hb_000740_070 Hb_007765_060--Hb_000740_070 Hb_005725_070 Hb_005725_070 Hb_007765_060--Hb_005725_070 Hb_000487_100 Hb_000487_100 Hb_007765_060--Hb_000487_100 Hb_007765_060--Hb_001956_050 Hb_000544_040 Hb_000544_040 Hb_007765_060--Hb_000544_040 Hb_007765_060--Hb_004117_030 Hb_000025_750 Hb_000025_750 Hb_001408_090--Hb_000025_750 Hb_003216_110 Hb_003216_110 Hb_001408_090--Hb_003216_110 Hb_001227_110 Hb_001227_110 Hb_001408_090--Hb_001227_110 Hb_002025_140 Hb_002025_140 Hb_001408_090--Hb_002025_140 Hb_000331_480 Hb_000331_480 Hb_001408_090--Hb_000331_480 Hb_001498_030 Hb_001498_030 Hb_001408_090--Hb_001498_030 Hb_003540_140 Hb_003540_140 Hb_022749_030--Hb_003540_140 Hb_004307_040 Hb_004307_040 Hb_022749_030--Hb_004307_040 Hb_000329_540 Hb_000329_540 Hb_022749_030--Hb_000329_540 Hb_000156_030 Hb_000156_030 Hb_022749_030--Hb_000156_030 Hb_000018_160 Hb_000018_160 Hb_022749_030--Hb_000018_160 Hb_008147_030 Hb_008147_030 Hb_022749_030--Hb_008147_030 Hb_002783_120 Hb_002783_120 Hb_000453_190--Hb_002783_120 Hb_005695_060 Hb_005695_060 Hb_000453_190--Hb_005695_060 Hb_000345_530 Hb_000345_530 Hb_000453_190--Hb_000345_530 Hb_007951_100 Hb_007951_100 Hb_000453_190--Hb_007951_100 Hb_001160_120 Hb_001160_120 Hb_000453_190--Hb_001160_120 Hb_001001_020 Hb_001001_020 Hb_000453_190--Hb_001001_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.87739 1.36384 3.91285 0 4.52235 3.39102
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.99623 0 2.62103 1.12085 0

CAGE analysis