Hb_032920_060

Information

Type -
Description -
Location Contig32920: 51393-56073
Sequence    

Annotation

kegg
ID rcu:RCOM_0175090
description mitotic checkpoint protein bub3, putative
nr
ID XP_012093110.1
description PREDICTED: mitotic checkpoint protein BUB3.1 [Jatropha curcas]
swissprot
ID Q9LJN8
description Mitotic checkpoint protein BUB3.1 OS=Arabidopsis thaliana GN=BUB3.1 PE=1 SV=1
trembl
ID A0A067LJL2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16317 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34627: 51501-55925
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032920_060 0.0 - - PREDICTED: mitotic checkpoint protein BUB3.1 [Jatropha curcas]
2 Hb_003528_010 0.0610101827 transcription factor TF Family: MYB PREDICTED: myb-related protein 3R-1 [Jatropha curcas]
3 Hb_005337_090 0.0722005568 - - PREDICTED: serine/threonine-protein kinase TOUSLED-like [Jatropha curcas]
4 Hb_027428_010 0.0736264314 - - alpha-1,3-mannosyltransferase, putative [Ricinus communis]
5 Hb_073973_130 0.0739841873 - - PREDICTED: prolyl-tRNA synthetase associated domain-containing protein 1 [Jatropha curcas]
6 Hb_002192_080 0.0751846134 - - hypothetical protein B456_013G069200 [Gossypium raimondii]
7 Hb_012389_020 0.077591488 - - hypothetical protein POPTR_0006s05190g [Populus trichocarpa]
8 Hb_000107_190 0.0776574861 - - 50S ribosomal protein L20 [Hevea brasiliensis]
9 Hb_002872_030 0.0840612146 - - PREDICTED: OTU domain-containing protein DDB_G0284757 [Jatropha curcas]
10 Hb_000185_070 0.0847832123 - - conserved hypothetical protein [Ricinus communis]
11 Hb_007416_300 0.0858824503 - - PREDICTED: COP9 signalosome complex subunit 5b-like [Jatropha curcas]
12 Hb_010381_090 0.0867596466 - - PREDICTED: protein FLX-like 3 [Jatropha curcas]
13 Hb_001926_030 0.0868945128 - - PREDICTED: apoptosis inhibitor 5 [Jatropha curcas]
14 Hb_143395_010 0.0883426708 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
15 Hb_002197_020 0.0886981459 - - DNA-directed RNA polymerase family protein [Theobroma cacao]
16 Hb_007982_080 0.0891156931 - - PREDICTED: uncharacterized protein LOC105636531 [Jatropha curcas]
17 Hb_004046_050 0.0893622889 - - PREDICTED: origin of replication complex subunit 3 [Jatropha curcas]
18 Hb_000308_030 0.089712631 - - PREDICTED: uncharacterized protein LOC105639686 [Jatropha curcas]
19 Hb_004310_020 0.0901722437 - - PREDICTED: COP9 signalosome complex subunit 7 isoform X1 [Jatropha curcas]
20 Hb_001051_080 0.0912315617 - - hypothetical protein EUGRSUZ_B02508 [Eucalyptus grandis]

Gene co-expression network

sample Hb_032920_060 Hb_032920_060 Hb_003528_010 Hb_003528_010 Hb_032920_060--Hb_003528_010 Hb_005337_090 Hb_005337_090 Hb_032920_060--Hb_005337_090 Hb_027428_010 Hb_027428_010 Hb_032920_060--Hb_027428_010 Hb_073973_130 Hb_073973_130 Hb_032920_060--Hb_073973_130 Hb_002192_080 Hb_002192_080 Hb_032920_060--Hb_002192_080 Hb_012389_020 Hb_012389_020 Hb_032920_060--Hb_012389_020 Hb_000185_070 Hb_000185_070 Hb_003528_010--Hb_000185_070 Hb_003549_150 Hb_003549_150 Hb_003528_010--Hb_003549_150 Hb_010381_090 Hb_010381_090 Hb_003528_010--Hb_010381_090 Hb_006588_200 Hb_006588_200 Hb_003528_010--Hb_006588_200 Hb_000205_300 Hb_000205_300 Hb_003528_010--Hb_000205_300 Hb_001089_110 Hb_001089_110 Hb_005337_090--Hb_001089_110 Hb_005337_090--Hb_027428_010 Hb_000308_030 Hb_000308_030 Hb_005337_090--Hb_000308_030 Hb_000005_220 Hb_000005_220 Hb_005337_090--Hb_000005_220 Hb_005337_090--Hb_073973_130 Hb_033834_030 Hb_033834_030 Hb_005337_090--Hb_033834_030 Hb_002872_030 Hb_002872_030 Hb_027428_010--Hb_002872_030 Hb_027428_010--Hb_073973_130 Hb_006588_070 Hb_006588_070 Hb_027428_010--Hb_006588_070 Hb_027428_010--Hb_000185_070 Hb_027428_010--Hb_010381_090 Hb_000107_190 Hb_000107_190 Hb_073973_130--Hb_000107_190 Hb_073973_130--Hb_002872_030 Hb_022132_050 Hb_022132_050 Hb_073973_130--Hb_022132_050 Hb_000610_010 Hb_000610_010 Hb_073973_130--Hb_000610_010 Hb_002192_080--Hb_012389_020 Hb_000261_250 Hb_000261_250 Hb_002192_080--Hb_000261_250 Hb_106552_050 Hb_106552_050 Hb_002192_080--Hb_106552_050 Hb_002192_080--Hb_000107_190 Hb_003849_060 Hb_003849_060 Hb_002192_080--Hb_003849_060 Hb_004586_140 Hb_004586_140 Hb_012389_020--Hb_004586_140 Hb_003125_200 Hb_003125_200 Hb_012389_020--Hb_003125_200 Hb_004931_070 Hb_004931_070 Hb_012389_020--Hb_004931_070 Hb_000302_270 Hb_000302_270 Hb_012389_020--Hb_000302_270 Hb_000853_430 Hb_000853_430 Hb_012389_020--Hb_000853_430
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.3402 13.1926 19.3259 13.6752 17.302 22.5813
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.5749 17.773 14.179 12.9321 4.28545

CAGE analysis