Hb_033152_040

Information

Type -
Description -
Location Contig33152: 34896-35932
Sequence    

Annotation

kegg
ID pop:POPTR_0009s11040g
description POPTRDRAFT_1087031; hypothetical protein
nr
ID XP_012072465.1
description PREDICTED: salicylic acid-binding protein 2-like [Jatropha curcas]
swissprot
ID Q6RYA0
description Salicylic acid-binding protein 2 OS=Nicotiana tabacum GN=SABP2 PE=1 SV=1
trembl
ID A0A067KTI5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04891 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033152_040 0.0 - - PREDICTED: salicylic acid-binding protein 2-like [Jatropha curcas]
2 Hb_007479_030 0.209443983 - - PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 3 [Jatropha curcas]
3 Hb_114861_010 0.2570651817 - - STRESS ENHANCED protein 1 [Populus trichocarpa]
4 Hb_006538_180 0.2649708962 transcription factor TF Family: C2C2-CO-like zinc finger family protein [Populus trichocarpa]
5 Hb_001484_080 0.2675134744 - - 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]
6 Hb_000184_030 0.2700265157 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
7 Hb_000387_090 0.2791007234 - - PREDICTED: uncharacterized protein LOC104115978 [Nicotiana tomentosiformis]
8 Hb_186054_010 0.2870965613 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
9 Hb_003005_040 0.2898025612 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
10 Hb_013253_030 0.291471286 - - PREDICTED: protein argonaute 16 isoform X1 [Jatropha curcas]
11 Hb_005344_030 0.29553553 - - PREDICTED: UDP-glycosyltransferase 74F2-like [Jatropha curcas]
12 Hb_000837_010 0.2983315022 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
13 Hb_008698_010 0.2990530428 - - PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Jatropha curcas]
14 Hb_000062_520 0.3006163835 - - conserved hypothetical protein [Ricinus communis]
15 Hb_104721_010 0.3006571603 - - PREDICTED: uncharacterized protein LOC105763691 [Gossypium raimondii]
16 Hb_000156_210 0.3009170019 - - PREDICTED: metal transporter Nramp1 [Jatropha curcas]
17 Hb_000445_200 0.3025705861 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
18 Hb_000816_220 0.3047008531 - - PREDICTED: CBL-interacting protein kinase 18-like [Jatropha curcas]
19 Hb_001621_060 0.3059131641 - - PREDICTED: thylakoid lumenal 15 kDa protein 1, chloroplastic [Jatropha curcas]
20 Hb_000043_100 0.3081962178 - - PREDICTED: uncharacterized protein LOC105797583 [Gossypium raimondii]

Gene co-expression network

sample Hb_033152_040 Hb_033152_040 Hb_007479_030 Hb_007479_030 Hb_033152_040--Hb_007479_030 Hb_114861_010 Hb_114861_010 Hb_033152_040--Hb_114861_010 Hb_006538_180 Hb_006538_180 Hb_033152_040--Hb_006538_180 Hb_001484_080 Hb_001484_080 Hb_033152_040--Hb_001484_080 Hb_000184_030 Hb_000184_030 Hb_033152_040--Hb_000184_030 Hb_000387_090 Hb_000387_090 Hb_033152_040--Hb_000387_090 Hb_000816_220 Hb_000816_220 Hb_007479_030--Hb_000816_220 Hb_007479_030--Hb_000387_090 Hb_013253_030 Hb_013253_030 Hb_007479_030--Hb_013253_030 Hb_000445_200 Hb_000445_200 Hb_007479_030--Hb_000445_200 Hb_007479_030--Hb_001484_080 Hb_114861_010--Hb_001484_080 Hb_001792_030 Hb_001792_030 Hb_114861_010--Hb_001792_030 Hb_007044_250 Hb_007044_250 Hb_114861_010--Hb_007044_250 Hb_000189_520 Hb_000189_520 Hb_114861_010--Hb_000189_520 Hb_005489_090 Hb_005489_090 Hb_114861_010--Hb_005489_090 Hb_000110_230 Hb_000110_230 Hb_114861_010--Hb_000110_230 Hb_009620_060 Hb_009620_060 Hb_006538_180--Hb_009620_060 Hb_006538_180--Hb_001484_080 Hb_000252_180 Hb_000252_180 Hb_006538_180--Hb_000252_180 Hb_000367_140 Hb_000367_140 Hb_006538_180--Hb_000367_140 Hb_006538_180--Hb_000184_030 Hb_000017_130 Hb_000017_130 Hb_006538_180--Hb_000017_130 Hb_001484_080--Hb_007044_250 Hb_000977_270 Hb_000977_270 Hb_001484_080--Hb_000977_270 Hb_003106_170 Hb_003106_170 Hb_001484_080--Hb_003106_170 Hb_001484_080--Hb_001792_030 Hb_003752_060 Hb_003752_060 Hb_001484_080--Hb_003752_060 Hb_009615_180 Hb_009615_180 Hb_000184_030--Hb_009615_180 Hb_001294_030 Hb_001294_030 Hb_000184_030--Hb_001294_030 Hb_000062_520 Hb_000062_520 Hb_000184_030--Hb_000062_520 Hb_000184_030--Hb_000189_520 Hb_000184_030--Hb_001484_080 Hb_000184_030--Hb_114861_010 Hb_000387_090--Hb_000445_200 Hb_001344_030 Hb_001344_030 Hb_000387_090--Hb_001344_030 Hb_116020_010 Hb_116020_010 Hb_000387_090--Hb_116020_010 Hb_000387_090--Hb_013253_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0523238 0.708356 0.044528 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.37237 1.54844 0.427819 0.208286 4.08586

CAGE analysis