Hb_033153_010

Information

Type -
Description -
Location Contig33153: 7948-11104
Sequence    

Annotation

kegg
ID rcu:RCOM_1011300
description Protein MLO, putative
nr
ID XP_012091678.1
description PREDICTED: MLO-like protein 12 [Jatropha curcas]
swissprot
ID Q94KB7
description MLO-like protein 6 OS=Arabidopsis thaliana GN=MLO6 PE=2 SV=2
trembl
ID B9S928
description MLO-like protein OS=Ricinus communis GN=MLO PE=3 SV=1
Gene Ontology
ID GO:0016021
description mlo-like protein 12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34866: 8101-8521
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033153_010 0.0 - - PREDICTED: MLO-like protein 12 [Jatropha curcas]
2 Hb_000414_100 0.0964795916 - - PREDICTED: uncharacterized protein LOC105643784 [Jatropha curcas]
3 Hb_005648_030 0.0993124795 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH18-like [Jatropha curcas]
4 Hb_002760_060 0.1042494167 - - PREDICTED: uncharacterized protein LOC105641235 [Jatropha curcas]
5 Hb_001405_260 0.1099305516 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
6 Hb_005588_010 0.1123764914 - - PREDICTED: patatin-like protein 2 [Jatropha curcas]
7 Hb_007850_050 0.1150247862 - - flavonoid 3-hydroxylase, putative [Ricinus communis]
8 Hb_000959_290 0.1155295668 - - PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
9 Hb_078477_010 0.1158817128 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
10 Hb_001437_200 0.1182770049 - - PREDICTED: UDP-glycosyltransferase 86A2 [Jatropha curcas]
11 Hb_011671_290 0.1200314629 transcription factor TF Family: ERF hypothetical protein JCGZ_26299 [Jatropha curcas]
12 Hb_022630_010 0.1219488394 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
13 Hb_004994_070 0.1243145086 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
14 Hb_001277_150 0.1243963451 - - hypothetical protein VITISV_043492 [Vitis vinifera]
15 Hb_001190_020 0.1247697843 - - ankyrin repeat-containing protein, putative [Ricinus communis]
16 Hb_000333_150 0.1272474713 - - hypothetical protein RCOM_0711500 [Ricinus communis]
17 Hb_000563_380 0.1315827949 - - hypothetical protein CICLE_v10007206mg [Citrus clementina]
18 Hb_000635_170 0.1320044002 - - cytochrome P450, putative [Ricinus communis]
19 Hb_005643_020 0.1329720607 - - PREDICTED: U-box domain-containing protein 44-like [Jatropha curcas]
20 Hb_008931_020 0.1342098126 - - Receptor like protein 46, putative [Theobroma cacao]

Gene co-expression network

sample Hb_033153_010 Hb_033153_010 Hb_000414_100 Hb_000414_100 Hb_033153_010--Hb_000414_100 Hb_005648_030 Hb_005648_030 Hb_033153_010--Hb_005648_030 Hb_002760_060 Hb_002760_060 Hb_033153_010--Hb_002760_060 Hb_001405_260 Hb_001405_260 Hb_033153_010--Hb_001405_260 Hb_005588_010 Hb_005588_010 Hb_033153_010--Hb_005588_010 Hb_007850_050 Hb_007850_050 Hb_033153_010--Hb_007850_050 Hb_011671_290 Hb_011671_290 Hb_000414_100--Hb_011671_290 Hb_174829_040 Hb_174829_040 Hb_000414_100--Hb_174829_040 Hb_116349_050 Hb_116349_050 Hb_000414_100--Hb_116349_050 Hb_001437_200 Hb_001437_200 Hb_000414_100--Hb_001437_200 Hb_002572_060 Hb_002572_060 Hb_000414_100--Hb_002572_060 Hb_078477_010 Hb_078477_010 Hb_005648_030--Hb_078477_010 Hb_022630_010 Hb_022630_010 Hb_005648_030--Hb_022630_010 Hb_005648_030--Hb_001405_260 Hb_044026_010 Hb_044026_010 Hb_005648_030--Hb_044026_010 Hb_005648_030--Hb_005588_010 Hb_002760_060--Hb_000414_100 Hb_002760_060--Hb_174829_040 Hb_001277_150 Hb_001277_150 Hb_002760_060--Hb_001277_150 Hb_001514_040 Hb_001514_040 Hb_002760_060--Hb_001514_040 Hb_002760_060--Hb_011671_290 Hb_001405_260--Hb_044026_010 Hb_005643_020 Hb_005643_020 Hb_001405_260--Hb_005643_020 Hb_001405_260--Hb_005588_010 Hb_001405_260--Hb_078477_010 Hb_001405_260--Hb_022630_010 Hb_005588_010--Hb_005643_020 Hb_000522_120 Hb_000522_120 Hb_005588_010--Hb_000522_120 Hb_005588_010--Hb_022630_010 Hb_002864_040 Hb_002864_040 Hb_007850_050--Hb_002864_040 Hb_007850_050--Hb_005648_030 Hb_001403_070 Hb_001403_070 Hb_007850_050--Hb_001403_070 Hb_007850_050--Hb_001405_260 Hb_007850_050--Hb_078477_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.143146 64.0357 2.03829 2.60137 0.318766 0.32348
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.171985 0.135299 0 1.31934 0.67683

CAGE analysis