Hb_033187_010

Information

Type -
Description -
Location Contig33187: 5977-7116
Sequence    

Annotation

kegg
ID rcu:RCOM_1178720
description epoxide hydrolase, putative (EC:2.7.10.2)
nr
ID XP_002523108.1
description epoxide hydrolase, putative [Ricinus communis]
swissprot
ID Q6Q2C2
description Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1
trembl
ID B9SAT9
description Epoxide hydrolase, putative OS=Ricinus communis GN=RCOM_1178720 PE=4 SV=1
Gene Ontology
ID GO:0005777
description bifunctional epoxide hydrolase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34881: 5979-7056
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033187_010 0.0 - - epoxide hydrolase, putative [Ricinus communis]
2 Hb_000497_050 0.058505454 - - PREDICTED: photosystem II repair protein PSB27-H1, chloroplastic [Jatropha curcas]
3 Hb_011724_040 0.0645762478 - - PREDICTED: uncharacterized protein LOC105632860 [Jatropha curcas]
4 Hb_000179_010 0.0668083076 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
5 Hb_002752_020 0.0668151169 - - FKBP-type peptidyl-prolyl cis-trans isomerase 3 family protein [Populus trichocarpa]
6 Hb_006132_080 0.0696344607 - - PREDICTED: cytochrome P450 86A8-like [Jatropha curcas]
7 Hb_002121_050 0.0698911761 - - hypothetical protein EUGRSUZ_D02586 [Eucalyptus grandis]
8 Hb_029991_010 0.0728050251 - - hypothetical protein PRUPE_ppa001615mg [Prunus persica]
9 Hb_004032_400 0.0734743429 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
10 Hb_004837_010 0.0739241263 - - PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Jatropha curcas]
11 Hb_002534_020 0.074701143 - - PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Gossypium raimondii]
12 Hb_001735_040 0.0772113355 - - PREDICTED: F-box protein SKIP2-like isoform X2 [Populus euphratica]
13 Hb_004607_110 0.0779608842 - - PREDICTED: serine/threonine-protein kinase Nek6 [Jatropha curcas]
14 Hb_001307_050 0.0780208102 - - PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Jatropha curcas]
15 Hb_003913_120 0.0792654722 transcription factor TF Family: MYB hypothetical protein POPTR_0015s09430g [Populus trichocarpa]
16 Hb_146255_030 0.0810655531 transcription factor TF Family: bZIP PREDICTED: transcription factor HY5-like [Jatropha curcas]
17 Hb_001534_060 0.0812913479 - - PREDICTED: UDP-glycosyltransferase 73C3 [Jatropha curcas]
18 Hb_001277_350 0.085090064 - - early light-induced protein, putative [Ricinus communis]
19 Hb_000696_060 0.0858134421 - - conserved hypothetical protein [Ricinus communis]
20 Hb_004338_050 0.0873291176 - - hypothetical protein POPTR_0004s02760g [Populus trichocarpa]

Gene co-expression network

sample Hb_033187_010 Hb_033187_010 Hb_000497_050 Hb_000497_050 Hb_033187_010--Hb_000497_050 Hb_011724_040 Hb_011724_040 Hb_033187_010--Hb_011724_040 Hb_000179_010 Hb_000179_010 Hb_033187_010--Hb_000179_010 Hb_002752_020 Hb_002752_020 Hb_033187_010--Hb_002752_020 Hb_006132_080 Hb_006132_080 Hb_033187_010--Hb_006132_080 Hb_002121_050 Hb_002121_050 Hb_033187_010--Hb_002121_050 Hb_000497_050--Hb_002752_020 Hb_001277_350 Hb_001277_350 Hb_000497_050--Hb_001277_350 Hb_004338_050 Hb_004338_050 Hb_000497_050--Hb_004338_050 Hb_001307_050 Hb_001307_050 Hb_000497_050--Hb_001307_050 Hb_146255_030 Hb_146255_030 Hb_000497_050--Hb_146255_030 Hb_000497_050--Hb_002121_050 Hb_002534_020 Hb_002534_020 Hb_011724_040--Hb_002534_020 Hb_001534_060 Hb_001534_060 Hb_011724_040--Hb_001534_060 Hb_003632_020 Hb_003632_020 Hb_011724_040--Hb_003632_020 Hb_011724_040--Hb_006132_080 Hb_011724_040--Hb_002121_050 Hb_004837_010 Hb_004837_010 Hb_000179_010--Hb_004837_010 Hb_000251_150 Hb_000251_150 Hb_000179_010--Hb_000251_150 Hb_000179_010--Hb_001307_050 Hb_158001_010 Hb_158001_010 Hb_000179_010--Hb_158001_010 Hb_000046_400 Hb_000046_400 Hb_000179_010--Hb_000046_400 Hb_029991_010 Hb_029991_010 Hb_000179_010--Hb_029991_010 Hb_002752_020--Hb_146255_030 Hb_004032_400 Hb_004032_400 Hb_002752_020--Hb_004032_400 Hb_008225_050 Hb_008225_050 Hb_002752_020--Hb_008225_050 Hb_002752_020--Hb_001277_350 Hb_002752_020--Hb_004338_050 Hb_006132_080--Hb_002121_050 Hb_003186_030 Hb_003186_030 Hb_006132_080--Hb_003186_030 Hb_004452_070 Hb_004452_070 Hb_006132_080--Hb_004452_070 Hb_006132_080--Hb_000251_150 Hb_006132_080--Hb_000179_010 Hb_002121_050--Hb_002752_020 Hb_156093_010 Hb_156093_010 Hb_002121_050--Hb_156093_010 Hb_002121_050--Hb_008225_050 Hb_007537_040 Hb_007537_040 Hb_002121_050--Hb_007537_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0472936 2.20751 1.56059 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0424449 0 0.0341814 4.06587

CAGE analysis