Hb_033286_010

Information

Type -
Description -
Location Contig33286: 2603-10701
Sequence    

Annotation

kegg
ID pop:POPTR_0001s40320g
description galactosyltransferase family protein
nr
ID XP_012078580.1
description PREDICTED: probable beta-1,3-galactosyltransferase 14 [Jatropha curcas]
swissprot
ID Q8L7M1
description Probable beta-1,3-galactosyltransferase 14 OS=Arabidopsis thaliana GN=B3GALT14 PE=2 SV=1
trembl
ID A0A067KJT0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14728 PE=4 SV=1
Gene Ontology
ID GO:0005794
description probable beta- -galactosyltransferase 14

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34912: 2637-10649 , PASA_asmbl_34913: 9546-10232 , PASA_asmbl_34915: 3819-4237 , PASA_asmbl_34916: 5100-5492
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033286_010 0.0 - - PREDICTED: probable beta-1,3-galactosyltransferase 14 [Jatropha curcas]
2 Hb_000146_040 0.0626848714 - - PREDICTED: reticulon-like protein B11 [Jatropha curcas]
3 Hb_003671_010 0.0650743697 - - PREDICTED: protein transport protein SFT2 isoform X1 [Jatropha curcas]
4 Hb_001009_320 0.0734897433 - - PREDICTED: uncharacterized protein LOC105640250 [Jatropha curcas]
5 Hb_005946_210 0.0784349477 - - hypothetical protein JCGZ_07228 [Jatropha curcas]
6 Hb_000522_170 0.0810820255 - - PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 1 [Jatropha curcas]
7 Hb_000006_010 0.0812301637 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003683_020 0.0829709162 - - serine/threonine protein kinase, putative [Ricinus communis]
9 Hb_003528_030 0.0852820863 - - PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Jatropha curcas]
10 Hb_000260_330 0.0859853665 - - PREDICTED: uncharacterized protein LOC103438625 [Malus domestica]
11 Hb_000103_310 0.0860988944 - - PREDICTED: transmembrane emp24 domain-containing protein p24beta3 [Jatropha curcas]
12 Hb_002728_080 0.086616923 - - WD-repeat protein, putative [Ricinus communis]
13 Hb_000352_300 0.0866908629 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Jatropha curcas]
14 Hb_000161_040 0.0872718093 - - PREDICTED: protein EI24 homolog [Jatropha curcas]
15 Hb_000140_350 0.087562559 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004102_170 0.0883778792 - - PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Jatropha curcas]
17 Hb_004627_040 0.0887592179 - - hypothetical protein POPTR_0010s22770g [Populus trichocarpa]
18 Hb_000322_070 0.088802996 - - PREDICTED: glycylpeptide N-tetradecanoyltransferase 1 [Jatropha curcas]
19 Hb_001269_330 0.0896108031 - - PREDICTED: uncharacterized protein LOC105645377 [Jatropha curcas]
20 Hb_001789_030 0.0896447111 - - PREDICTED: signal peptide peptidase-like 1 [Jatropha curcas]

Gene co-expression network

sample Hb_033286_010 Hb_033286_010 Hb_000146_040 Hb_000146_040 Hb_033286_010--Hb_000146_040 Hb_003671_010 Hb_003671_010 Hb_033286_010--Hb_003671_010 Hb_001009_320 Hb_001009_320 Hb_033286_010--Hb_001009_320 Hb_005946_210 Hb_005946_210 Hb_033286_010--Hb_005946_210 Hb_000522_170 Hb_000522_170 Hb_033286_010--Hb_000522_170 Hb_000006_010 Hb_000006_010 Hb_033286_010--Hb_000006_010 Hb_000140_350 Hb_000140_350 Hb_000146_040--Hb_000140_350 Hb_004102_170 Hb_004102_170 Hb_000146_040--Hb_004102_170 Hb_000477_100 Hb_000477_100 Hb_000146_040--Hb_000477_100 Hb_007481_010 Hb_007481_010 Hb_000146_040--Hb_007481_010 Hb_005797_010 Hb_005797_010 Hb_000146_040--Hb_005797_010 Hb_003683_020 Hb_003683_020 Hb_003671_010--Hb_003683_020 Hb_000696_010 Hb_000696_010 Hb_003671_010--Hb_000696_010 Hb_002785_050 Hb_002785_050 Hb_003671_010--Hb_002785_050 Hb_000260_330 Hb_000260_330 Hb_003671_010--Hb_000260_330 Hb_001882_050 Hb_001882_050 Hb_003671_010--Hb_001882_050 Hb_001009_320--Hb_000006_010 Hb_000477_050 Hb_000477_050 Hb_001009_320--Hb_000477_050 Hb_001009_320--Hb_000522_170 Hb_000120_280 Hb_000120_280 Hb_001009_320--Hb_000120_280 Hb_015807_050 Hb_015807_050 Hb_001009_320--Hb_015807_050 Hb_000313_220 Hb_000313_220 Hb_001009_320--Hb_000313_220 Hb_010272_010 Hb_010272_010 Hb_005946_210--Hb_010272_010 Hb_000664_110 Hb_000664_110 Hb_005946_210--Hb_000664_110 Hb_001109_060 Hb_001109_060 Hb_005946_210--Hb_001109_060 Hb_008226_090 Hb_008226_090 Hb_005946_210--Hb_008226_090 Hb_012215_010 Hb_012215_010 Hb_005946_210--Hb_012215_010 Hb_002539_110 Hb_002539_110 Hb_005946_210--Hb_002539_110 Hb_000317_470 Hb_000317_470 Hb_000522_170--Hb_000317_470 Hb_000522_170--Hb_000006_010 Hb_001221_080 Hb_001221_080 Hb_000522_170--Hb_001221_080 Hb_021419_030 Hb_021419_030 Hb_000522_170--Hb_021419_030 Hb_000139_260 Hb_000139_260 Hb_000522_170--Hb_000139_260 Hb_000006_010--Hb_000139_260 Hb_023313_040 Hb_023313_040 Hb_000006_010--Hb_023313_040 Hb_000803_270 Hb_000803_270 Hb_000006_010--Hb_000803_270 Hb_000336_210 Hb_000336_210 Hb_000006_010--Hb_000336_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.73847 5.3908 6.86965 12.1628 8.92429 7.26297
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.67904 5.51429 5.90368 5.98687 5.53006

CAGE analysis