Hb_033555_010

Information

Type -
Description -
Location Contig33555: 19226-21857
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033555_010 0.0 - - -
2 Hb_000098_200 0.210744719 - - PREDICTED: serine hydroxymethyltransferase 7-like isoform X2 [Populus euphratica]
3 Hb_169586_010 0.2117344092 - - Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Theobroma cacao]
4 Hb_007718_020 0.2249702199 - - PREDICTED: receptor-like protein 12 [Camelina sativa]
5 Hb_002477_040 0.2264320649 - - P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 2 [Theobroma cacao]
6 Hb_000735_170 0.2333711884 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
7 Hb_004602_020 0.2446071239 transcription factor TF Family: SET PREDICTED: N-lysine methyltransferase setd6 isoform X2 [Jatropha curcas]
8 Hb_001146_050 0.2510870752 - - -
9 Hb_000940_170 0.2515761064 - - hypothetical protein VITISV_029834 [Vitis vinifera]
10 Hb_004657_030 0.2537230246 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX14 [Jatropha curcas]
11 Hb_003058_200 0.2574102033 - - PREDICTED: dihydropyrimidinase [Populus euphratica]
12 Hb_000575_100 0.2599020329 - - PREDICTED: nephrocystin-3 isoform X2 [Jatropha curcas]
13 Hb_002026_070 0.262688124 - - hypothetical protein PHAVU_002G2910001g, partial [Phaseolus vulgaris]
14 Hb_169656_010 0.2629045339 - - protein phosphatase, putative [Ricinus communis]
15 Hb_001631_100 0.2655841388 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
16 Hb_002928_200 0.2668514495 - - PREDICTED: Niemann-Pick C1 protein-like [Jatropha curcas]
17 Hb_000823_010 0.2672552009 - - PREDICTED: splicing factor U2af large subunit B isoform X1 [Jatropha curcas]
18 Hb_024570_040 0.2696880999 - - PREDICTED: clathrin interactor EPSIN 1 [Jatropha curcas]
19 Hb_002213_090 0.2714129488 - - PREDICTED: uncharacterized protein LOC105640147 [Jatropha curcas]
20 Hb_000768_160 0.2715655745 - - PREDICTED: uncharacterized protein LOC105632531 [Jatropha curcas]

Gene co-expression network

sample Hb_033555_010 Hb_033555_010 Hb_000098_200 Hb_000098_200 Hb_033555_010--Hb_000098_200 Hb_169586_010 Hb_169586_010 Hb_033555_010--Hb_169586_010 Hb_007718_020 Hb_007718_020 Hb_033555_010--Hb_007718_020 Hb_002477_040 Hb_002477_040 Hb_033555_010--Hb_002477_040 Hb_000735_170 Hb_000735_170 Hb_033555_010--Hb_000735_170 Hb_004602_020 Hb_004602_020 Hb_033555_010--Hb_004602_020 Hb_000235_050 Hb_000235_050 Hb_000098_200--Hb_000235_050 Hb_004746_010 Hb_004746_010 Hb_000098_200--Hb_004746_010 Hb_000755_060 Hb_000755_060 Hb_000098_200--Hb_000755_060 Hb_000029_440 Hb_000029_440 Hb_000098_200--Hb_000029_440 Hb_000401_010 Hb_000401_010 Hb_000098_200--Hb_000401_010 Hb_135959_010 Hb_135959_010 Hb_000098_200--Hb_135959_010 Hb_002026_070 Hb_002026_070 Hb_169586_010--Hb_002026_070 Hb_000330_150 Hb_000330_150 Hb_169586_010--Hb_000330_150 Hb_000940_170 Hb_000940_170 Hb_169586_010--Hb_000940_170 Hb_002928_200 Hb_002928_200 Hb_169586_010--Hb_002928_200 Hb_003058_200 Hb_003058_200 Hb_169586_010--Hb_003058_200 Hb_000768_160 Hb_000768_160 Hb_169586_010--Hb_000768_160 Hb_001146_050 Hb_001146_050 Hb_007718_020--Hb_001146_050 Hb_004878_010 Hb_004878_010 Hb_007718_020--Hb_004878_010 Hb_050034_010 Hb_050034_010 Hb_007718_020--Hb_050034_010 Hb_007456_020 Hb_007456_020 Hb_007718_020--Hb_007456_020 Hb_000771_090 Hb_000771_090 Hb_007718_020--Hb_000771_090 Hb_002213_090 Hb_002213_090 Hb_002477_040--Hb_002213_090 Hb_002686_310 Hb_002686_310 Hb_002477_040--Hb_002686_310 Hb_002477_040--Hb_002928_200 Hb_002851_010 Hb_002851_010 Hb_002477_040--Hb_002851_010 Hb_000723_010 Hb_000723_010 Hb_002477_040--Hb_000723_010 Hb_002477_040--Hb_135959_010 Hb_000735_170--Hb_000940_170 Hb_000130_070 Hb_000130_070 Hb_000735_170--Hb_000130_070 Hb_001631_100 Hb_001631_100 Hb_000735_170--Hb_001631_100 Hb_182680_010 Hb_182680_010 Hb_000735_170--Hb_182680_010 Hb_002477_220 Hb_002477_220 Hb_000735_170--Hb_002477_220 Hb_004602_020--Hb_004746_010 Hb_024570_040 Hb_024570_040 Hb_004602_020--Hb_024570_040 Hb_001434_020 Hb_001434_020 Hb_004602_020--Hb_001434_020 Hb_002284_100 Hb_002284_100 Hb_004602_020--Hb_002284_100 Hb_011214_110 Hb_011214_110 Hb_004602_020--Hb_011214_110 Hb_000849_080 Hb_000849_080 Hb_004602_020--Hb_000849_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0178864 0.017872 0.0408086 0.0999909 0.0837901 0.084739
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0321375 0 0.206006 0.132977

CAGE analysis