Hb_033642_040

Information

Type -
Description -
Location Contig33642: 50888-57153
Sequence    

Annotation

kegg
ID rcu:RCOM_1003850
description cytosolic purine 5-nucleotidase, putative (EC:3.1.3.5)
nr
ID XP_012084218.1
description PREDICTED: 5'-nucleotidase domain-containing protein 4 isoform X1 [Jatropha curcas]
swissprot
ID Q54XC1
description Cytosolic purine 5'-nucleotidase OS=Dictyostelium discoideum GN=nt5c2 PE=3 SV=1
trembl
ID A0A067JVU7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19097 PE=4 SV=1
Gene Ontology
ID GO:0009570
description 5 -nucleotidase domain-containing protein 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35238: 51030-53103 , PASA_asmbl_35239: 53506-56800 , PASA_asmbl_35240: 55825-56087 , PASA_asmbl_35241: 56379-56976 , PASA_asmbl_35242: 56999-57141
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033642_040 0.0 - - PREDICTED: 5'-nucleotidase domain-containing protein 4 isoform X1 [Jatropha curcas]
2 Hb_004096_060 0.0647132106 - - PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2 [Jatropha curcas]
3 Hb_000098_240 0.0721290497 - - PREDICTED: UDP-glucose:glycoprotein glucosyltransferase [Jatropha curcas]
4 Hb_000175_410 0.0782271279 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X2 [Jatropha curcas]
5 Hb_000820_150 0.0793506306 - - PREDICTED: ACT domain-containing protein ACR9-like [Jatropha curcas]
6 Hb_016777_040 0.0797823751 - - PREDICTED: DNA polymerase eta-like [Jatropha curcas]
7 Hb_008397_010 0.0803699458 - - PREDICTED: uncharacterized protein LOC105640192 isoform X2 [Jatropha curcas]
8 Hb_003186_020 0.0807022041 - - PREDICTED: histone deacetylase 15 isoform X1 [Jatropha curcas]
9 Hb_001158_160 0.0818735715 - - PREDICTED: RNA pseudouridine synthase 7 isoform X1 [Jatropha curcas]
10 Hb_008206_080 0.0829271078 - - PREDICTED: probable cyclic nucleotide-gated ion channel 17 [Jatropha curcas]
11 Hb_000373_080 0.0831522078 - - PREDICTED: serine decarboxylase [Jatropha curcas]
12 Hb_007413_040 0.0834037616 - - myo inositol monophosphatase, putative [Ricinus communis]
13 Hb_001931_030 0.0843951985 - - PREDICTED: T-complex protein 1 subunit eta-like [Nelumbo nucifera]
14 Hb_001002_060 0.085276648 - - PREDICTED: putative GPI-anchor transamidase [Jatropha curcas]
15 Hb_021943_080 0.0867472575 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHH3 isoform X1 [Jatropha curcas]
16 Hb_000702_090 0.0870859997 - - 26S proteasome non-ATPase regulatory subunit 11 [Theobroma cacao]
17 Hb_002326_110 0.0884913362 - - PREDICTED: uncharacterized protein LOC103320920 [Prunus mume]
18 Hb_002871_140 0.0889470701 - - hypothetical protein JCGZ_06847 [Jatropha curcas]
19 Hb_030982_010 0.0892276801 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000610_040 0.0896928963 - - PREDICTED: uncharacterized protein LOC105635307 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_033642_040 Hb_033642_040 Hb_004096_060 Hb_004096_060 Hb_033642_040--Hb_004096_060 Hb_000098_240 Hb_000098_240 Hb_033642_040--Hb_000098_240 Hb_000175_410 Hb_000175_410 Hb_033642_040--Hb_000175_410 Hb_000820_150 Hb_000820_150 Hb_033642_040--Hb_000820_150 Hb_016777_040 Hb_016777_040 Hb_033642_040--Hb_016777_040 Hb_008397_010 Hb_008397_010 Hb_033642_040--Hb_008397_010 Hb_004032_370 Hb_004032_370 Hb_004096_060--Hb_004032_370 Hb_025668_010 Hb_025668_010 Hb_004096_060--Hb_025668_010 Hb_000724_020 Hb_000724_020 Hb_004096_060--Hb_000724_020 Hb_001002_060 Hb_001002_060 Hb_004096_060--Hb_001002_060 Hb_002326_110 Hb_002326_110 Hb_004096_060--Hb_002326_110 Hb_016448_010 Hb_016448_010 Hb_000098_240--Hb_016448_010 Hb_000878_160 Hb_000878_160 Hb_000098_240--Hb_000878_160 Hb_001158_160 Hb_001158_160 Hb_000098_240--Hb_001158_160 Hb_026234_010 Hb_026234_010 Hb_000098_240--Hb_026234_010 Hb_000098_240--Hb_000820_150 Hb_003186_020 Hb_003186_020 Hb_000175_410--Hb_003186_020 Hb_003093_040 Hb_003093_040 Hb_000175_410--Hb_003093_040 Hb_013358_070 Hb_013358_070 Hb_000175_410--Hb_013358_070 Hb_031284_010 Hb_031284_010 Hb_000175_410--Hb_031284_010 Hb_000011_270 Hb_000011_270 Hb_000175_410--Hb_000011_270 Hb_000523_080 Hb_000523_080 Hb_000175_410--Hb_000523_080 Hb_001194_020 Hb_001194_020 Hb_000820_150--Hb_001194_020 Hb_098209_010 Hb_098209_010 Hb_000820_150--Hb_098209_010 Hb_005895_010 Hb_005895_010 Hb_000820_150--Hb_005895_010 Hb_003398_100 Hb_003398_100 Hb_000820_150--Hb_003398_100 Hb_000640_070 Hb_000640_070 Hb_000820_150--Hb_000640_070 Hb_002889_010 Hb_002889_010 Hb_016777_040--Hb_002889_010 Hb_002471_240 Hb_002471_240 Hb_016777_040--Hb_002471_240 Hb_001377_310 Hb_001377_310 Hb_016777_040--Hb_001377_310 Hb_000373_080 Hb_000373_080 Hb_016777_040--Hb_000373_080 Hb_001089_070 Hb_001089_070 Hb_016777_040--Hb_001089_070 Hb_002805_190 Hb_002805_190 Hb_016777_040--Hb_002805_190 Hb_008397_010--Hb_000640_070 Hb_008397_010--Hb_001194_020 Hb_000336_020 Hb_000336_020 Hb_008397_010--Hb_000336_020 Hb_000284_230 Hb_000284_230 Hb_008397_010--Hb_000284_230 Hb_073973_150 Hb_073973_150 Hb_008397_010--Hb_073973_150 Hb_007894_160 Hb_007894_160 Hb_008397_010--Hb_007894_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.09049 5.96707 12.6922 8.8153 6.18061 6.68225
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.08266 2.87596 2.88161 8.54685 8.59895

CAGE analysis