Hb_033642_070

Information

Type -
Description -
Location Contig33642: 92406-93122
Sequence    

Annotation

kegg
ID mdm:103456207
description oligopeptide transporter 7-like
nr
ID XP_012066014.1
description PREDICTED: oligopeptide transporter 7-like [Jatropha curcas]
swissprot
ID O82485
description Oligopeptide transporter 7 OS=Arabidopsis thaliana GN=OPT7 PE=2 SV=1
trembl
ID A0A067LPH1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06558 PE=4 SV=1
Gene Ontology
ID GO:0015198
description oligopeptide transporter 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033642_070 0.0 - - PREDICTED: oligopeptide transporter 7-like [Jatropha curcas]
2 Hb_003126_020 0.0898954648 - - Oligopeptide transporter, putative [Ricinus communis]
3 Hb_158696_010 0.1349318086 - - PREDICTED: putative disease resistance protein RGA4, partial [Jatropha curcas]
4 Hb_001863_450 0.1377852516 - - cryptochrome 1.2 [Populus tremula]
5 Hb_001662_170 0.1380578516 - - PREDICTED: phospholipase D delta-like [Jatropha curcas]
6 Hb_056012_010 0.1391114535 - - PREDICTED: TMV resistance protein N-like [Pyrus x bretschneideri]
7 Hb_004466_070 0.1392376997 - - hypothetical protein RCOM_1447500 [Ricinus communis]
8 Hb_000803_060 0.1400491847 - - poly(p)/ATP NAD kinase, putative [Ricinus communis]
9 Hb_002686_400 0.1453625343 - - hypothetical protein POPTR_0019s04500g [Populus trichocarpa]
10 Hb_004106_010 0.1470513534 - - PREDICTED: protein GPR107 isoform X1 [Jatropha curcas]
11 Hb_009897_020 0.14844489 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
12 Hb_004032_310 0.1486034032 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 14 [Jatropha curcas]
13 Hb_001053_200 0.1494034562 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
14 Hb_008103_100 0.1567025096 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPS2 [Jatropha curcas]
15 Hb_001489_120 0.1589377448 - - PREDICTED: alpha-amylase 3, chloroplastic [Jatropha curcas]
16 Hb_089100_040 0.1606823724 - - PREDICTED: uncharacterized protein LOC105638961 [Jatropha curcas]
17 Hb_012787_040 0.1610811441 - - PREDICTED: uncharacterized protein LOC105649794 isoform X2 [Jatropha curcas]
18 Hb_001865_060 0.1629260707 - - PREDICTED: uncharacterized protein LOC105647962 [Jatropha curcas]
19 Hb_000010_350 0.1653720139 - - PREDICTED: programmed cell death protein 4-like [Jatropha curcas]
20 Hb_003752_120 0.1680757705 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_033642_070 Hb_033642_070 Hb_003126_020 Hb_003126_020 Hb_033642_070--Hb_003126_020 Hb_158696_010 Hb_158696_010 Hb_033642_070--Hb_158696_010 Hb_001863_450 Hb_001863_450 Hb_033642_070--Hb_001863_450 Hb_001662_170 Hb_001662_170 Hb_033642_070--Hb_001662_170 Hb_056012_010 Hb_056012_010 Hb_033642_070--Hb_056012_010 Hb_004466_070 Hb_004466_070 Hb_033642_070--Hb_004466_070 Hb_001053_200 Hb_001053_200 Hb_003126_020--Hb_001053_200 Hb_003126_020--Hb_001662_170 Hb_002233_070 Hb_002233_070 Hb_003126_020--Hb_002233_070 Hb_003126_020--Hb_158696_010 Hb_004106_010 Hb_004106_010 Hb_003126_020--Hb_004106_010 Hb_158696_010--Hb_004106_010 Hb_012787_040 Hb_012787_040 Hb_158696_010--Hb_012787_040 Hb_158696_010--Hb_001662_170 Hb_003752_120 Hb_003752_120 Hb_158696_010--Hb_003752_120 Hb_093177_010 Hb_093177_010 Hb_158696_010--Hb_093177_010 Hb_004631_110 Hb_004631_110 Hb_158696_010--Hb_004631_110 Hb_004166_010 Hb_004166_010 Hb_001863_450--Hb_004166_010 Hb_001863_450--Hb_004466_070 Hb_003371_140 Hb_003371_140 Hb_001863_450--Hb_003371_140 Hb_008253_040 Hb_008253_040 Hb_001863_450--Hb_008253_040 Hb_000172_080 Hb_000172_080 Hb_001863_450--Hb_000172_080 Hb_001662_170--Hb_004106_010 Hb_001662_170--Hb_012787_040 Hb_004032_310 Hb_004032_310 Hb_001662_170--Hb_004032_310 Hb_001662_170--Hb_001053_200 Hb_001662_170--Hb_003752_120 Hb_011360_090 Hb_011360_090 Hb_001662_170--Hb_011360_090 Hb_000803_060 Hb_000803_060 Hb_056012_010--Hb_000803_060 Hb_102100_010 Hb_102100_010 Hb_056012_010--Hb_102100_010 Hb_000220_090 Hb_000220_090 Hb_056012_010--Hb_000220_090 Hb_001258_150 Hb_001258_150 Hb_056012_010--Hb_001258_150 Hb_185513_010 Hb_185513_010 Hb_056012_010--Hb_185513_010 Hb_056012_010--Hb_001662_170 Hb_004466_070--Hb_158696_010 Hb_001248_110 Hb_001248_110 Hb_004466_070--Hb_001248_110 Hb_004466_070--Hb_004166_010 Hb_004466_070--Hb_003371_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.0597 8.00984 0.973599 1.59424 0.73296 0.399841
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.287931 0.226305 0.132587 1.66722 1.17415

CAGE analysis