Hb_033691_010

Information

Type -
Description -
Location Contig33691: 99-901
Sequence    

Annotation

kegg
ID rcu:RCOM_0774380
description Lignin-forming anionic peroxidase precursor, putative (EC:1.11.1.7)
nr
ID XP_002521852.1
description Lignin-forming anionic peroxidase precursor, putative [Ricinus communis]
swissprot
ID Q02200
description Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1
trembl
ID B9S783
description Peroxidase OS=Ricinus communis GN=RCOM_0774380 PE=3 SV=1
Gene Ontology
ID GO:0004601
description lignin-forming anionic peroxidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033691_010 0.0 - - Lignin-forming anionic peroxidase precursor, putative [Ricinus communis]
2 Hb_160479_010 0.0350176496 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
3 Hb_010068_010 0.0565539838 - - PREDICTED: uncharacterized protein LOC105633273 [Jatropha curcas]
4 Hb_051900_020 0.0668657101 - - JHL22C18.7 [Jatropha curcas]
5 Hb_000926_240 0.0768325738 - - hypothetical protein PRUPE_ppb018041mg [Prunus persica]
6 Hb_001369_510 0.0806177716 - - PREDICTED: uncharacterized protein LOC105766768 [Gossypium raimondii]
7 Hb_041332_010 0.0836831807 - - DNA binding protein, putative [Ricinus communis]
8 Hb_100953_010 0.09915 - - hypothetical protein JCGZ_10310 [Jatropha curcas]
9 Hb_000935_060 0.0993175405 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 8-like [Jatropha curcas]
10 Hb_002267_110 0.1002777932 - - -
11 Hb_002235_330 0.1056281251 - - PREDICTED: expansin-A1 isoform X1 [Jatropha curcas]
12 Hb_004102_150 0.1102971033 - - Late embryogenesis abundant protein D-7, putative [Ricinus communis]
13 Hb_070266_010 0.1114920656 - - LRR.XII-like protein, partial [Platanus x acerifolia]
14 Hb_004317_020 0.112499743 - - PREDICTED: protein CHROMOSOME TRANSMISSION FIDELITY 7-like [Malus domestica]
15 Hb_000566_060 0.1162441128 - - conserved hypothetical protein [Ricinus communis]
16 Hb_007138_010 0.1198098964 - - PREDICTED: putative laccase-9 [Jatropha curcas]
17 Hb_005389_030 0.1272910012 - - hypothetical protein VITISV_023348 [Vitis vinifera]
18 Hb_002641_090 0.1278914625 - - PREDICTED: uncharacterized protein LOC105643559 [Jatropha curcas]
19 Hb_034858_010 0.1364144358 - - -
20 Hb_011609_200 0.1366093772 - - PREDICTED: ultraviolet-B receptor UVR8-like isoform X3 [Populus euphratica]

Gene co-expression network

sample Hb_033691_010 Hb_033691_010 Hb_160479_010 Hb_160479_010 Hb_033691_010--Hb_160479_010 Hb_010068_010 Hb_010068_010 Hb_033691_010--Hb_010068_010 Hb_051900_020 Hb_051900_020 Hb_033691_010--Hb_051900_020 Hb_000926_240 Hb_000926_240 Hb_033691_010--Hb_000926_240 Hb_001369_510 Hb_001369_510 Hb_033691_010--Hb_001369_510 Hb_041332_010 Hb_041332_010 Hb_033691_010--Hb_041332_010 Hb_160479_010--Hb_010068_010 Hb_160479_010--Hb_000926_240 Hb_160479_010--Hb_051900_020 Hb_004317_020 Hb_004317_020 Hb_160479_010--Hb_004317_020 Hb_000935_060 Hb_000935_060 Hb_160479_010--Hb_000935_060 Hb_010068_010--Hb_000926_240 Hb_010068_010--Hb_004317_020 Hb_010068_010--Hb_051900_020 Hb_000566_060 Hb_000566_060 Hb_010068_010--Hb_000566_060 Hb_002235_330 Hb_002235_330 Hb_051900_020--Hb_002235_330 Hb_051900_020--Hb_000566_060 Hb_051900_020--Hb_004317_020 Hb_000926_240--Hb_000935_060 Hb_004102_150 Hb_004102_150 Hb_000926_240--Hb_004102_150 Hb_000926_240--Hb_004317_020 Hb_034858_010 Hb_034858_010 Hb_000926_240--Hb_034858_010 Hb_100953_010 Hb_100953_010 Hb_001369_510--Hb_100953_010 Hb_007138_010 Hb_007138_010 Hb_001369_510--Hb_007138_010 Hb_005389_030 Hb_005389_030 Hb_001369_510--Hb_005389_030 Hb_005357_040 Hb_005357_040 Hb_001369_510--Hb_005357_040 Hb_000028_450 Hb_000028_450 Hb_001369_510--Hb_000028_450 Hb_002267_110 Hb_002267_110 Hb_041332_010--Hb_002267_110 Hb_070266_010 Hb_070266_010 Hb_041332_010--Hb_070266_010 Hb_004598_020 Hb_004598_020 Hb_041332_010--Hb_004598_020 Hb_041332_010--Hb_001369_510 Hb_041332_010--Hb_051900_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.242842 1.21199 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0759239 0

CAGE analysis