Hb_033720_030

Information

Type -
Description -
Location Contig33720: 21636-24507
Sequence    

Annotation

kegg
ID rcu:RCOM_1495960
description KDEL motif-containing protein 1 precursor, putative
nr
ID XP_002510788.1
description KDEL motif-containing protein 1 precursor, putative [Ricinus communis]
swissprot
ID B0X1Q4
description O-glucosyltransferase rumi homolog OS=Culex quinquefasciatus GN=CPIJ013394 PE=3 SV=1
trembl
ID B9R9B3
description KDEL motif-containing protein 1, putative OS=Ricinus communis GN=RCOM_1495960 PE=4 SV=1
Gene Ontology
ID GO:0016740
description o-glucosyltransferase rumi homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35305: 23610-24435
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033720_030 0.0 - - KDEL motif-containing protein 1 precursor, putative [Ricinus communis]
2 Hb_002276_080 0.1085861262 - - Protein bem46, putative [Ricinus communis]
3 Hb_162472_010 0.1094359906 - - conserved hypothetical protein [Ricinus communis]
4 Hb_004195_070 0.1142309855 - - cytochrome P450, putative [Ricinus communis]
5 Hb_004223_060 0.1191338366 - - PREDICTED: WEB family protein At1g75720 [Jatropha curcas]
6 Hb_000922_400 0.1224805781 - - PREDICTED: uncharacterized protein LOC105640363 [Jatropha curcas]
7 Hb_001025_130 0.1276799174 - - PREDICTED: uncharacterized protein LOC105640342 [Jatropha curcas]
8 Hb_000261_070 0.1281504019 - - PREDICTED: F-box/kelch-repeat protein At3g06240-like [Jatropha curcas]
9 Hb_150299_010 0.1310349 - - PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 1-like [Tarenaya hassleriana]
10 Hb_000003_610 0.1324394028 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase [Jatropha curcas]
11 Hb_000003_370 0.1327396734 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 3 [Jatropha curcas]
12 Hb_028487_060 0.1355276591 - - PREDICTED: 21 kDa protein-like [Jatropha curcas]
13 Hb_003086_160 0.1362821994 - - hypothetical protein POPTR_0006s21590g [Populus trichocarpa]
14 Hb_000022_080 0.1363067479 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
15 Hb_007904_280 0.1385143957 - - PREDICTED: uncharacterized protein LOC105644987 [Jatropha curcas]
16 Hb_000413_120 0.1391334229 - - PREDICTED: BTB/POZ domain-containing protein At3g22104-like [Jatropha curcas]
17 Hb_007122_020 0.1395260841 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
18 Hb_006483_070 0.139611792 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
19 Hb_002267_060 0.1412024723 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 3 [Jatropha curcas]
20 Hb_005496_040 0.14496041 - - PREDICTED: uncharacterized protein LOC105630864 [Jatropha curcas]

Gene co-expression network

sample Hb_033720_030 Hb_033720_030 Hb_002276_080 Hb_002276_080 Hb_033720_030--Hb_002276_080 Hb_162472_010 Hb_162472_010 Hb_033720_030--Hb_162472_010 Hb_004195_070 Hb_004195_070 Hb_033720_030--Hb_004195_070 Hb_004223_060 Hb_004223_060 Hb_033720_030--Hb_004223_060 Hb_000922_400 Hb_000922_400 Hb_033720_030--Hb_000922_400 Hb_001025_130 Hb_001025_130 Hb_033720_030--Hb_001025_130 Hb_004899_230 Hb_004899_230 Hb_002276_080--Hb_004899_230 Hb_002276_080--Hb_162472_010 Hb_006483_070 Hb_006483_070 Hb_002276_080--Hb_006483_070 Hb_000005_290 Hb_000005_290 Hb_002276_080--Hb_000005_290 Hb_004162_200 Hb_004162_200 Hb_002276_080--Hb_004162_200 Hb_162472_010--Hb_001025_130 Hb_001975_110 Hb_001975_110 Hb_162472_010--Hb_001975_110 Hb_162472_010--Hb_006483_070 Hb_001709_120 Hb_001709_120 Hb_162472_010--Hb_001709_120 Hb_162472_010--Hb_000005_290 Hb_000022_080 Hb_000022_080 Hb_004195_070--Hb_000022_080 Hb_004195_070--Hb_162472_010 Hb_004195_070--Hb_001025_130 Hb_026218_010 Hb_026218_010 Hb_004195_070--Hb_026218_010 Hb_004195_070--Hb_006483_070 Hb_007904_280 Hb_007904_280 Hb_004223_060--Hb_007904_280 Hb_000878_050 Hb_000878_050 Hb_004223_060--Hb_000878_050 Hb_000077_280 Hb_000077_280 Hb_004223_060--Hb_000077_280 Hb_000003_370 Hb_000003_370 Hb_004223_060--Hb_000003_370 Hb_000103_450 Hb_000103_450 Hb_004223_060--Hb_000103_450 Hb_000392_110 Hb_000392_110 Hb_004223_060--Hb_000392_110 Hb_006002_050 Hb_006002_050 Hb_000922_400--Hb_006002_050 Hb_000345_550 Hb_000345_550 Hb_000922_400--Hb_000345_550 Hb_005784_010 Hb_005784_010 Hb_000922_400--Hb_005784_010 Hb_012055_070 Hb_012055_070 Hb_000922_400--Hb_012055_070 Hb_002783_280 Hb_002783_280 Hb_000922_400--Hb_002783_280 Hb_001025_130--Hb_001709_120 Hb_015292_020 Hb_015292_020 Hb_001025_130--Hb_015292_020 Hb_001025_130--Hb_006483_070 Hb_000586_110 Hb_000586_110 Hb_001025_130--Hb_000586_110 Hb_002902_060 Hb_002902_060 Hb_001025_130--Hb_002902_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.336345 0.713334 5.44255 11.0404 0.203412 0.290666
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0210348 0.0794208 0.058673 2.83119

CAGE analysis