Hb_034132_010

Information

Type -
Description -
Location Contig34132: 179-1624
Sequence    

Annotation

kegg
ID mdm:103439871
description calcineurin B-like protein 4
nr
ID KJB39473.1
description hypothetical protein B456_007G015400 [Gossypium raimondii]
swissprot
ID O81223
description Calcineurin B-like protein 4 OS=Arabidopsis thaliana GN=CBL4 PE=1 SV=3
trembl
ID A0A0D2QJN7
description Gossypium raimondii chromosome 7, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_007G015400 PE=4 SV=1
Gene Ontology
ID GO:0005509
description calcineurin b-like protein 4 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_034132_010 0.0 - - hypothetical protein B456_007G015400 [Gossypium raimondii]
2 Hb_001565_050 0.0665719058 - - PREDICTED: receptor-like protein kinase 5 [Eucalyptus grandis]
3 Hb_015978_040 0.0670775071 - - PREDICTED: uncharacterized protein LOC105642609 [Jatropha curcas]
4 Hb_022768_010 0.0801720579 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Populus euphratica]
5 Hb_117602_010 0.0848236455 - - dimethylaniline monooxygenase, putative [Ricinus communis]
6 Hb_005843_080 0.0886978462 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
7 Hb_005725_180 0.0928975936 - - -
8 Hb_000086_600 0.0936302736 - - -
9 Hb_012691_040 0.0990148285 - - PREDICTED: cytochrome P450 81E8-like [Fragaria vesca subsp. vesca]
10 Hb_032966_010 0.0996658055 - - receptor serine/threonine kinase, putative [Ricinus communis]
11 Hb_142691_010 0.1015827129 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
12 Hb_005843_070 0.1019586278 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
13 Hb_001514_110 0.1034292907 - - conserved hypothetical protein [Ricinus communis]
14 Hb_106810_010 0.1042950431 - - receptor serine/threonine kinase, putative [Ricinus communis]
15 Hb_008579_010 0.1111381278 - - hypothetical protein JCGZ_01311 [Jatropha curcas]
16 Hb_005618_020 0.111233542 - - hypothetical protein RCOM_1342750 [Ricinus communis]
17 Hb_004117_360 0.1147909956 - - hypothetical protein JCGZ_00367 [Jatropha curcas]
18 Hb_004157_080 0.116239767 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT12 [Jatropha curcas]
19 Hb_002486_030 0.1164324749 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]
20 Hb_005946_190 0.1164778256 - - hypothetical protein EUGRSUZ_C01051 [Eucalyptus grandis]

Gene co-expression network

sample Hb_034132_010 Hb_034132_010 Hb_001565_050 Hb_001565_050 Hb_034132_010--Hb_001565_050 Hb_015978_040 Hb_015978_040 Hb_034132_010--Hb_015978_040 Hb_022768_010 Hb_022768_010 Hb_034132_010--Hb_022768_010 Hb_117602_010 Hb_117602_010 Hb_034132_010--Hb_117602_010 Hb_005843_080 Hb_005843_080 Hb_034132_010--Hb_005843_080 Hb_005725_180 Hb_005725_180 Hb_034132_010--Hb_005725_180 Hb_142691_010 Hb_142691_010 Hb_001565_050--Hb_142691_010 Hb_012691_040 Hb_012691_040 Hb_001565_050--Hb_012691_040 Hb_001565_050--Hb_015978_040 Hb_008579_010 Hb_008579_010 Hb_001565_050--Hb_008579_010 Hb_001514_110 Hb_001514_110 Hb_001565_050--Hb_001514_110 Hb_015978_040--Hb_005725_180 Hb_015978_040--Hb_022768_010 Hb_032966_010 Hb_032966_010 Hb_015978_040--Hb_032966_010 Hb_005843_070 Hb_005843_070 Hb_015978_040--Hb_005843_070 Hb_031862_150 Hb_031862_150 Hb_022768_010--Hb_031862_150 Hb_022768_010--Hb_001565_050 Hb_005946_190 Hb_005946_190 Hb_022768_010--Hb_005946_190 Hb_022768_010--Hb_005725_180 Hb_000086_600 Hb_000086_600 Hb_117602_010--Hb_000086_600 Hb_117602_010--Hb_001565_050 Hb_117602_010--Hb_005843_080 Hb_189242_010 Hb_189242_010 Hb_117602_010--Hb_189242_010 Hb_117602_010--Hb_142691_010 Hb_005843_080--Hb_001565_050 Hb_005843_080--Hb_015978_040 Hb_005843_080--Hb_000086_600 Hb_005843_080--Hb_142691_010 Hb_005725_180--Hb_005843_070 Hb_005725_180--Hb_001514_110 Hb_005725_180--Hb_012691_040 Hb_004117_360 Hb_004117_360 Hb_005725_180--Hb_004117_360 Hb_111908_010 Hb_111908_010 Hb_005725_180--Hb_111908_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0849359 11.0618 2.2066 0.729343 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0510958 0

CAGE analysis