Hb_034310_010

Information

Type -
Description -
Location Contig34310: 17743-28087
Sequence    

Annotation

kegg
ID pmum:103321739
description aldehyde dehydrogenase family 2 member B7, mitochondrial
nr
ID XP_012085348.1
description PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
swissprot
ID Q8S528
description Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2
trembl
ID A0A067K2T2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17723 PE=3 SV=1
Gene Ontology
ID GO:0004029
description aldehyde dehydrogenase family 2 member mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35878: 17892-18607 , PASA_asmbl_35879: 17791-18098
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_034310_010 0.0 - - PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
2 Hb_032202_130 0.1740588976 - - PREDICTED: uncharacterized protein LOC105643062 [Jatropha curcas]
3 Hb_000083_110 0.1818072685 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
4 Hb_123475_020 0.1893542036 - - -
5 Hb_011161_030 0.2005013318 - - PREDICTED: uncharacterized protein LOC105638906 [Jatropha curcas]
6 Hb_173029_030 0.2047765013 - - conserved hypothetical protein [Ricinus communis]
7 Hb_004495_010 0.20951664 - - PREDICTED: thioredoxin reductase NTRC [Sesamum indicum]
8 Hb_000960_120 0.2114773793 - - PREDICTED: cell division cycle 20.1, cofactor of APC complex-like [Jatropha curcas]
9 Hb_022092_040 0.2145591732 - - PREDICTED: serine/arginine repetitive matrix protein 1 [Jatropha curcas]
10 Hb_183719_010 0.21508693 - - PREDICTED: kinesin-related protein 13 [Jatropha curcas]
11 Hb_001762_050 0.2175405418 - - PREDICTED: xylem cysteine proteinase 1 [Jatropha curcas]
12 Hb_005686_100 0.2190570273 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000896_130 0.2209541681 transcription factor TF Family: CPP cysteine-rich polycomb-like family protein [Populus trichocarpa]
14 Hb_007894_100 0.2216662513 - - PREDICTED: uncharacterized protein LOC105632952 [Jatropha curcas]
15 Hb_144649_010 0.223761113 - - 60S ribosomal protein L34A [Hevea brasiliensis]
16 Hb_000260_610 0.2283528942 - - PREDICTED: cell division cycle 20.1, cofactor of APC complex-like [Jatropha curcas]
17 Hb_000577_050 0.2285624883 - - -
18 Hb_000261_340 0.2347938405 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
19 Hb_000521_180 0.2386336183 - - PREDICTED: uncharacterized protein LOC105650335 [Jatropha curcas]
20 Hb_028487_120 0.2415988007 - - PREDICTED: HMG-Y-related protein B-like [Jatropha curcas]

Gene co-expression network

sample Hb_034310_010 Hb_034310_010 Hb_032202_130 Hb_032202_130 Hb_034310_010--Hb_032202_130 Hb_000083_110 Hb_000083_110 Hb_034310_010--Hb_000083_110 Hb_123475_020 Hb_123475_020 Hb_034310_010--Hb_123475_020 Hb_011161_030 Hb_011161_030 Hb_034310_010--Hb_011161_030 Hb_173029_030 Hb_173029_030 Hb_034310_010--Hb_173029_030 Hb_004495_010 Hb_004495_010 Hb_034310_010--Hb_004495_010 Hb_000260_610 Hb_000260_610 Hb_032202_130--Hb_000260_610 Hb_006775_070 Hb_006775_070 Hb_032202_130--Hb_006775_070 Hb_000960_120 Hb_000960_120 Hb_032202_130--Hb_000960_120 Hb_013344_010 Hb_013344_010 Hb_032202_130--Hb_013344_010 Hb_000577_050 Hb_000577_050 Hb_032202_130--Hb_000577_050 Hb_103339_010 Hb_103339_010 Hb_000083_110--Hb_103339_010 Hb_001279_050 Hb_001279_050 Hb_000083_110--Hb_001279_050 Hb_002307_040 Hb_002307_040 Hb_000083_110--Hb_002307_040 Hb_028487_120 Hb_028487_120 Hb_000083_110--Hb_028487_120 Hb_000083_110--Hb_000960_120 Hb_002613_030 Hb_002613_030 Hb_000083_110--Hb_002613_030 Hb_002874_210 Hb_002874_210 Hb_123475_020--Hb_002874_210 Hb_028639_040 Hb_028639_040 Hb_123475_020--Hb_028639_040 Hb_123475_020--Hb_004495_010 Hb_107174_010 Hb_107174_010 Hb_123475_020--Hb_107174_010 Hb_005686_100 Hb_005686_100 Hb_123475_020--Hb_005686_100 Hb_129459_010 Hb_129459_010 Hb_011161_030--Hb_129459_010 Hb_011161_030--Hb_004495_010 Hb_074184_010 Hb_074184_010 Hb_011161_030--Hb_074184_010 Hb_002374_330 Hb_002374_330 Hb_011161_030--Hb_002374_330 Hb_000172_490 Hb_000172_490 Hb_011161_030--Hb_000172_490 Hb_001536_020 Hb_001536_020 Hb_173029_030--Hb_001536_020 Hb_001638_120 Hb_001638_120 Hb_173029_030--Hb_001638_120 Hb_022092_040 Hb_022092_040 Hb_173029_030--Hb_022092_040 Hb_000308_010 Hb_000308_010 Hb_173029_030--Hb_000308_010 Hb_000042_390 Hb_000042_390 Hb_173029_030--Hb_000042_390 Hb_008250_020 Hb_008250_020 Hb_173029_030--Hb_008250_020 Hb_183192_010 Hb_183192_010 Hb_004495_010--Hb_183192_010 Hb_000521_180 Hb_000521_180 Hb_004495_010--Hb_000521_180 Hb_065755_020 Hb_065755_020 Hb_004495_010--Hb_065755_020 Hb_004495_010--Hb_074184_010 Hb_009979_010 Hb_009979_010 Hb_004495_010--Hb_009979_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.548383 1.31535 6.11466 1.66317 0.567469 0.106066
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0127466 0 0.040471 0.0271415

CAGE analysis