Hb_034342_010

Information

Type -
Description -
Location Contig34342: 47-211
Sequence    

Annotation

kegg
ID rcu:RCOM_0885160
description hypothetical protein
nr
ID XP_002522637.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S9G8
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0885160 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_034342_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001424_080 0.0332821664 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
3 Hb_126077_020 0.0681503498 - - Kinase family protein with leucine-rich repeat domain [Theobroma cacao]
4 Hb_003556_060 0.0792767355 - - -
5 Hb_001663_100 0.0811327421 - - -
6 Hb_022998_010 0.1014820411 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_000692_180 0.102627821 - - PREDICTED: uncharacterized protein At1g76070 [Jatropha curcas]
8 Hb_001481_030 0.1344142597 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_002400_250 0.1400218486 - - amino acid binding protein, putative [Ricinus communis]
10 Hb_000720_110 0.1403351231 - - hypothetical protein JCGZ_20628 [Jatropha curcas]
11 Hb_002716_080 0.146103106 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
12 Hb_186298_010 0.1492878404 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_017866_020 0.1558261501 transcription factor TF Family: WRKY WRKY transcription factor 40 [Jatropha curcas]
14 Hb_000676_030 0.1587288384 - - PREDICTED: probable mitochondrial chaperone BCS1-B [Jatropha curcas]
15 Hb_001953_130 0.1598868696 - - PREDICTED: uncharacterized protein LOC105648901 [Jatropha curcas]
16 Hb_151281_010 0.1612150438 - - PREDICTED: LOW QUALITY PROTEIN: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
17 Hb_003938_010 0.1622823263 transcription factor TF Family: ERF Ethylene-responsive transcription factor 1B, putative [Ricinus communis]
18 Hb_002236_070 0.1625244614 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH36-like [Jatropha curcas]
19 Hb_001838_010 0.1639634847 - - hypothetical protein POPTR_0005s18380g [Populus trichocarpa]
20 Hb_165404_010 0.1647383926 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]

Gene co-expression network

sample Hb_034342_010 Hb_034342_010 Hb_001424_080 Hb_001424_080 Hb_034342_010--Hb_001424_080 Hb_126077_020 Hb_126077_020 Hb_034342_010--Hb_126077_020 Hb_003556_060 Hb_003556_060 Hb_034342_010--Hb_003556_060 Hb_001663_100 Hb_001663_100 Hb_034342_010--Hb_001663_100 Hb_022998_010 Hb_022998_010 Hb_034342_010--Hb_022998_010 Hb_000692_180 Hb_000692_180 Hb_034342_010--Hb_000692_180 Hb_001424_080--Hb_001663_100 Hb_001424_080--Hb_126077_020 Hb_001424_080--Hb_000692_180 Hb_001424_080--Hb_003556_060 Hb_002400_250 Hb_002400_250 Hb_001424_080--Hb_002400_250 Hb_126077_020--Hb_003556_060 Hb_126077_020--Hb_022998_010 Hb_126077_020--Hb_001663_100 Hb_186298_010 Hb_186298_010 Hb_126077_020--Hb_186298_010 Hb_003556_060--Hb_022998_010 Hb_017866_020 Hb_017866_020 Hb_003556_060--Hb_017866_020 Hb_000077_460 Hb_000077_460 Hb_003556_060--Hb_000077_460 Hb_001663_100--Hb_000692_180 Hb_001663_100--Hb_022998_010 Hb_000462_020 Hb_000462_020 Hb_001663_100--Hb_000462_020 Hb_007432_050 Hb_007432_050 Hb_022998_010--Hb_007432_050 Hb_000649_030 Hb_000649_030 Hb_022998_010--Hb_000649_030 Hb_000720_110 Hb_000720_110 Hb_000692_180--Hb_000720_110 Hb_000692_180--Hb_000462_020 Hb_000692_180--Hb_022998_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 213.419 44.4284 55.3389 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 203.033 0

CAGE analysis