Hb_034359_010

Information

Type -
Description -
Location Contig34359: 829-1290
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_034359_010 0.0 - - -
2 Hb_105123_020 0.1806862559 - - conserved hypothetical protein [Ricinus communis]
3 Hb_062317_020 0.2388204774 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001320_020 0.2441365394 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
5 Hb_007718_020 0.2588668129 - - PREDICTED: receptor-like protein 12 [Camelina sativa]
6 Hb_074670_010 0.27902886 - - hypothetical protein VITISV_015625 [Vitis vinifera]
7 Hb_056012_020 0.2865515614 - - -
8 Hb_002255_080 0.2981904814 - - -
9 Hb_004878_010 0.3053477901 - - -
10 Hb_012490_110 0.3067455762 - - PREDICTED: uncharacterized membrane protein C776.05 [Jatropha curcas]
11 Hb_002639_010 0.3111800743 - - pseudouridylate synthase, putative [Ricinus communis]
12 Hb_001146_050 0.3170393282 - - -
13 Hb_000366_020 0.3174393619 - - -
14 Hb_038862_010 0.330932269 - - PREDICTED: uncharacterized protein LOC104883809 [Beta vulgaris subsp. vulgaris]
15 Hb_000771_090 0.3318645356 - - hypothetical protein B456_012G003500 [Gossypium raimondii]
16 Hb_001652_070 0.333339257 - - PREDICTED: uncharacterized protein LOC103439285 [Malus domestica]
17 Hb_001496_050 0.334604251 - - yth domain-containing protein, putative [Ricinus communis]
18 Hb_004244_010 0.3358475983 - - hypothetical protein JCGZ_06191 [Jatropha curcas]
19 Hb_012650_010 0.3362515647 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
20 Hb_000659_090 0.3389049567 desease resistance Gene Name: NB-ARC leucine-rich repeat containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_034359_010 Hb_034359_010 Hb_105123_020 Hb_105123_020 Hb_034359_010--Hb_105123_020 Hb_062317_020 Hb_062317_020 Hb_034359_010--Hb_062317_020 Hb_001320_020 Hb_001320_020 Hb_034359_010--Hb_001320_020 Hb_007718_020 Hb_007718_020 Hb_034359_010--Hb_007718_020 Hb_074670_010 Hb_074670_010 Hb_034359_010--Hb_074670_010 Hb_056012_020 Hb_056012_020 Hb_034359_010--Hb_056012_020 Hb_007595_060 Hb_007595_060 Hb_105123_020--Hb_007595_060 Hb_001758_030 Hb_001758_030 Hb_105123_020--Hb_001758_030 Hb_097981_010 Hb_097981_010 Hb_105123_020--Hb_097981_010 Hb_001519_230 Hb_001519_230 Hb_105123_020--Hb_001519_230 Hb_095399_010 Hb_095399_010 Hb_105123_020--Hb_095399_010 Hb_062317_020--Hb_001320_020 Hb_001496_050 Hb_001496_050 Hb_062317_020--Hb_001496_050 Hb_000968_070 Hb_000968_070 Hb_062317_020--Hb_000968_070 Hb_007520_070 Hb_007520_070 Hb_062317_020--Hb_007520_070 Hb_007793_030 Hb_007793_030 Hb_062317_020--Hb_007793_030 Hb_001320_020--Hb_001496_050 Hb_001320_020--Hb_000968_070 Hb_001320_020--Hb_007520_070 Hb_001320_020--Hb_007793_030 Hb_000028_380 Hb_000028_380 Hb_001320_020--Hb_000028_380 Hb_001146_050 Hb_001146_050 Hb_007718_020--Hb_001146_050 Hb_004878_010 Hb_004878_010 Hb_007718_020--Hb_004878_010 Hb_033555_010 Hb_033555_010 Hb_007718_020--Hb_033555_010 Hb_050034_010 Hb_050034_010 Hb_007718_020--Hb_050034_010 Hb_007456_020 Hb_007456_020 Hb_007718_020--Hb_007456_020 Hb_000771_090 Hb_000771_090 Hb_007718_020--Hb_000771_090 Hb_002639_010 Hb_002639_010 Hb_074670_010--Hb_002639_010 Hb_074670_010--Hb_007718_020 Hb_166631_010 Hb_166631_010 Hb_074670_010--Hb_166631_010 Hb_168386_010 Hb_168386_010 Hb_074670_010--Hb_168386_010 Hb_001341_190 Hb_001341_190 Hb_074670_010--Hb_001341_190 Hb_000566_180 Hb_000566_180 Hb_056012_020--Hb_000566_180 Hb_001157_100 Hb_001157_100 Hb_056012_020--Hb_001157_100 Hb_000366_020 Hb_000366_020 Hb_056012_020--Hb_000366_020 Hb_008447_030 Hb_008447_030 Hb_056012_020--Hb_008447_030 Hb_069033_010 Hb_069033_010 Hb_056012_020--Hb_069033_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0681224 0 0.0941646 0 0.256237
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.151452 0.220915

CAGE analysis