Hb_034558_010

Information

Type -
Description -
Location Contig34558: 29561-32829
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_034558_010 0.0 - - -
2 Hb_128894_010 0.015802307 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_106595_010 0.0310857705 - - hypothetical protein B456_003G065300 [Gossypium raimondii]
4 Hb_007658_030 0.0387961375 - - PREDICTED: lupeol synthase-like isoform X1 [Populus euphratica]
5 Hb_001766_090 0.0393131059 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
6 Hb_044724_020 0.0428800519 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Fragaria vesca subsp. vesca]
7 Hb_000484_050 0.0461094357 - - hypothetical protein CICLE_v10028549mg [Citrus clementina]
8 Hb_030593_010 0.0522967226 - - hypothetical protein JCGZ_06063 [Jatropha curcas]
9 Hb_000215_380 0.0538912112 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
10 Hb_007328_020 0.0552350247 - - -
11 Hb_000563_370 0.0560201958 - - hypothetical protein JCGZ_18919 [Jatropha curcas]
12 Hb_007264_050 0.0592628008 - - -
13 Hb_011909_130 0.0640178566 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Populus euphratica]
14 Hb_030312_060 0.0653849297 - - PREDICTED: uncharacterized protein LOC105634226 [Jatropha curcas]
15 Hb_023827_010 0.0719346718 - - Cucumber peeling cupredoxin, putative [Ricinus communis]
16 Hb_009740_010 0.0814337484 - - receptor-kinase, putative [Ricinus communis]
17 Hb_064583_010 0.0824946607 - - PREDICTED: germin-like protein subfamily 1 member 7 [Vitis vinifera]
18 Hb_099085_010 0.0970685262 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
19 Hb_011639_130 0.1001872107 - - mads box protein, putative [Ricinus communis]
20 Hb_000016_290 0.1009258507 - - multidrug resistance pump, putative [Ricinus communis]

Gene co-expression network

sample Hb_034558_010 Hb_034558_010 Hb_128894_010 Hb_128894_010 Hb_034558_010--Hb_128894_010 Hb_106595_010 Hb_106595_010 Hb_034558_010--Hb_106595_010 Hb_007658_030 Hb_007658_030 Hb_034558_010--Hb_007658_030 Hb_001766_090 Hb_001766_090 Hb_034558_010--Hb_001766_090 Hb_044724_020 Hb_044724_020 Hb_034558_010--Hb_044724_020 Hb_000484_050 Hb_000484_050 Hb_034558_010--Hb_000484_050 Hb_128894_010--Hb_106595_010 Hb_128894_010--Hb_044724_020 Hb_000215_380 Hb_000215_380 Hb_128894_010--Hb_000215_380 Hb_007328_020 Hb_007328_020 Hb_128894_010--Hb_007328_020 Hb_000563_370 Hb_000563_370 Hb_128894_010--Hb_000563_370 Hb_106595_010--Hb_044724_020 Hb_106595_010--Hb_000215_380 Hb_106595_010--Hb_007328_020 Hb_106595_010--Hb_000563_370 Hb_007658_030--Hb_000484_050 Hb_011909_130 Hb_011909_130 Hb_007658_030--Hb_011909_130 Hb_030593_010 Hb_030593_010 Hb_007658_030--Hb_030593_010 Hb_007658_030--Hb_001766_090 Hb_007658_030--Hb_128894_010 Hb_001766_090--Hb_030593_010 Hb_023827_010 Hb_023827_010 Hb_001766_090--Hb_023827_010 Hb_001766_090--Hb_128894_010 Hb_001766_090--Hb_000484_050 Hb_044724_020--Hb_000215_380 Hb_044724_020--Hb_007328_020 Hb_044724_020--Hb_000563_370 Hb_007264_050 Hb_007264_050 Hb_044724_020--Hb_007264_050 Hb_000484_050--Hb_011909_130 Hb_000484_050--Hb_030593_010 Hb_011639_130 Hb_011639_130 Hb_000484_050--Hb_011639_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.179946 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0100969 0

CAGE analysis