Hb_034726_010

Information

Type -
Description -
Location Contig34726: 1006-2517
Sequence    

Annotation

kegg
ID vvi:100268143
description dnaJ homolog 1, mitochondrial
nr
ID XP_012073152.1
description PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X2 [Jatropha curcas]
swissprot
ID Q55505
description Chaperone protein DnaJ 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dnaJ1 PE=3 SV=1
trembl
ID A0A067KYY6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06120 PE=3 SV=1
Gene Ontology
ID GO:0044434
description chaperone protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_034726_010 0.0 - - PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X2 [Jatropha curcas]
2 Hb_003207_150 0.1145018738 - - PREDICTED: SPX domain-containing membrane protein At4g22990-like [Jatropha curcas]
3 Hb_000177_110 0.1203577735 - - PREDICTED: uncharacterized protein LOC105642063 [Jatropha curcas]
4 Hb_053709_040 0.1254937853 - - putative actin-97 protein [Linum usitatissimum]
5 Hb_001369_630 0.1318118059 - - PREDICTED: UDP-glucuronate 4-epimerase 3-like [Jatropha curcas]
6 Hb_001102_160 0.1434350251 - - PREDICTED: galacturonokinase [Jatropha curcas]
7 Hb_001366_170 0.1482132311 - - PREDICTED: uncharacterized protein C594.04c [Jatropha curcas]
8 Hb_000808_150 0.1500643336 - - PREDICTED: uncharacterized protein LOC105647444 [Jatropha curcas]
9 Hb_000246_130 0.1507212603 - - tubulin alpha chain, putative [Ricinus communis]
10 Hb_000086_090 0.1538099696 - - PREDICTED: U-box domain-containing protein 3 [Jatropha curcas]
11 Hb_010883_180 0.1574629528 transcription factor TF Family: CSD PREDICTED: glycine-rich protein 2-like [Jatropha curcas]
12 Hb_000023_110 0.1587557498 - - PREDICTED: probable methyltransferase PMT21 [Jatropha curcas]
13 Hb_084147_010 0.1616683034 - - amino acid transporter, putative [Ricinus communis]
14 Hb_002498_030 0.1624202263 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000935_040 0.1649783657 - - Uncharacterized protein isoform 2 [Theobroma cacao]
16 Hb_017439_010 0.1650314226 - - putative actin-97 protein [Linum usitatissimum]
17 Hb_000671_130 0.1731717106 - - PREDICTED: CMP-sialic acid transporter 2 isoform X2 [Jatropha curcas]
18 Hb_000696_070 0.1737887067 - - PREDICTED: aspartic proteinase-like protein 1 [Jatropha curcas]
19 Hb_122636_010 0.1743078197 - - dienelactone hydrolase family protein [Populus trichocarpa]
20 Hb_002316_080 0.1745970861 - - PREDICTED: RING-H2 finger protein ATL46-like [Populus euphratica]

Gene co-expression network

sample Hb_034726_010 Hb_034726_010 Hb_003207_150 Hb_003207_150 Hb_034726_010--Hb_003207_150 Hb_000177_110 Hb_000177_110 Hb_034726_010--Hb_000177_110 Hb_053709_040 Hb_053709_040 Hb_034726_010--Hb_053709_040 Hb_001369_630 Hb_001369_630 Hb_034726_010--Hb_001369_630 Hb_001102_160 Hb_001102_160 Hb_034726_010--Hb_001102_160 Hb_001366_170 Hb_001366_170 Hb_034726_010--Hb_001366_170 Hb_003207_150--Hb_000177_110 Hb_003207_150--Hb_053709_040 Hb_003207_150--Hb_001366_170 Hb_000671_130 Hb_000671_130 Hb_003207_150--Hb_000671_130 Hb_122636_010 Hb_122636_010 Hb_003207_150--Hb_122636_010 Hb_000424_030 Hb_000424_030 Hb_000177_110--Hb_000424_030 Hb_007483_060 Hb_007483_060 Hb_000177_110--Hb_007483_060 Hb_002217_500 Hb_002217_500 Hb_000177_110--Hb_002217_500 Hb_000177_110--Hb_000671_130 Hb_053709_040--Hb_001366_170 Hb_008185_020 Hb_008185_020 Hb_053709_040--Hb_008185_020 Hb_007632_100 Hb_007632_100 Hb_053709_040--Hb_007632_100 Hb_053709_040--Hb_000177_110 Hb_000935_040 Hb_000935_040 Hb_001369_630--Hb_000935_040 Hb_000696_070 Hb_000696_070 Hb_001369_630--Hb_000696_070 Hb_002007_320 Hb_002007_320 Hb_001369_630--Hb_002007_320 Hb_000808_150 Hb_000808_150 Hb_001369_630--Hb_000808_150 Hb_003371_070 Hb_003371_070 Hb_001369_630--Hb_003371_070 Hb_000049_160 Hb_000049_160 Hb_001369_630--Hb_000049_160 Hb_084147_010 Hb_084147_010 Hb_001102_160--Hb_084147_010 Hb_012395_110 Hb_012395_110 Hb_001102_160--Hb_012395_110 Hb_004007_070 Hb_004007_070 Hb_001102_160--Hb_004007_070 Hb_019516_060 Hb_019516_060 Hb_001102_160--Hb_019516_060 Hb_000086_090 Hb_000086_090 Hb_001102_160--Hb_000086_090 Hb_000246_130 Hb_000246_130 Hb_001102_160--Hb_000246_130 Hb_001902_200 Hb_001902_200 Hb_001366_170--Hb_001902_200 Hb_002490_030 Hb_002490_030 Hb_001366_170--Hb_002490_030 Hb_006351_020 Hb_006351_020 Hb_001366_170--Hb_006351_020 Hb_004032_210 Hb_004032_210 Hb_001366_170--Hb_004032_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.60647 6.55288 25.3502 74.855 1.17891 6.67365
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.28859 9.91694 4.98053 7.21577 22.846

CAGE analysis